Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03934 ATGGCTCCTGGTCATCTTCTTCCAATGGTAGACATGGCAAAGTTACTAGCACGTCGCAAAGTTAAGGTAACAATAATCACCACACCCCTTAATTCCATTCAATTCAAATCAAGCATAGATAGAGAGATTCAATTAGGATCACAAATTCAAATTGTTAACATTAAATTTCCAAATGTAGAGTCTGGAATACCTGAGGGATGTGAAAGTGTTGATACTTTACCTTCAATGGATTTAATGTCCAATTTTTACATAGCTTTATGTAAATTGAAAAATCCACttgaaaatgtttttcaaaatttaagacCGGTTCCTAGTTGTGTGATTTCAGATAAACACATTTCGTGTGTAGCTGAAATTGCAATGAAATTCAAAGTTCCAAGAATTATATTCGATGGGACTAATTGTTTTCATCTATTGTGCAATCATAATTTGCGCAATTTAAATGGTAGTATTcctaatgaaggaaaatttgTTGTTCCGGGAATGCCTGATCAAATTGAATTGAGAAAATGTCAGCTTCCTGGGTTGTTTAATCCCggggaaaataaaaaattaaatagttttcGCGAAGAAGTAcaggaaatagaaaaatattcatATGGTATAGTGGTTAATAGTTTTGAagaattggaagaaaaatatgTTAAAGAGTATAAAAGAGTAAGTGGTTATGAAGTATGGTGTGTTGGTCCTGTTTCATTATGTAACAATGATAAGTTGGATAAAGTTGAAAgagTTATTTATGTTTGTCTTGGTAGTTTAAACCGTGCAACACCTCAACAATTGAAAGAAGTTGGATTAGGATTAGAGGCAACAAAAAGGCCATTTATTTGGGTGTTGAGGGGTGCATATGGAAAAGATGAAATGGATAAATGGTTAATTGAAGAAGGGTTTGAAGAAAGGGTGAAAAATAGAGGTTTTTTGATAAAGGGTTGGGCACCACAAGTGTTGATTTTGTCACACAAAGCAATAGGTGTTTTTTTGACACATTGTGGATGGAATTCAACATTGGAAGGTATTTGTGGTGGGGTGCCTTTAGTAACTTTTCCTATGTTTGCTGAGCAATTTTATAATGAGAAAGTTGTGGTGCAAGTTGTGAAGAGTGGTGTGAGTTTGGGAGCTCAAAGTGCTGTGCATTTAGGAGAGGAAGAAAAGTTTTGTGTTGTGgttaaaaaggaaaatgttagaGATGCTATTGAGAAGGTAATGGGTGAAggtgaagaaaatgaaaagattaGGGAAAGAGCTAGAAAATATGCTGATCTTGCAAAGGAAGCATTAGAAGAAGGTGGATCTTCTTATCACAACATGACTCGATTAATTGAAGATATAATGCATGTCCCAAGTTTATGTTAA 1356 0.3134 MAPGHLLPMVDMAKLLARRKVKVTIITTPLNSIQFKSSIDREIQLGSQIQIVNIKFPNVESGIPEGCESVDTLPSMDLMSNFYIALCKLKNPLENVFQNLRPVPSCVISDKHISCVAEIAMKFKVPRIIFDGTNCFHLLCNHNLRNLNGSIPNEGKFVVPGMPDQIELRKCQLPGLFNPGENKKLNSFREEVQEIEKYSYGIVVNSFEELEEKYVKEYKRVSGYEVWCVGPVSLCNNDKLDKVERVIYVCLGSLNRATPQQLKEVGLGLEATKRPFIWVLRGAYGKDEMDKWLIEEGFEERVKNRGFLIKGWAPQVLILSHKAIGVFLTHCGWNSTLEGICGGVPLVTFPMFAEQFYNEKVVVQVVKSGVSLGAQSAVHLGEEEKFCVVVKKENVRDAIEKVMGEGEENEKIRERARKYADLAKEALEEGGSSYHNMTRLIEDIMHVPSLC 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03934 451 Gene3D Glycogen Phosphorylase B; 1 243 - -
Tsu07g03934 451 Gene3D Glycogen Phosphorylase B; 244 428 - -
Tsu07g03934 451 Coils Coil 409 429 - -
Tsu07g03934 451 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 246 371 IPR002213 GO:0008194
Tsu07g03934 451 PANTHER GLYCOSYLTRANSFERASE 1 245 - -
Tsu07g03934 451 PANTHER GLYCOSYLTRANSFERASE 1 245 - -
Tsu07g03934 451 PANTHER GLYCOSYLTRANSFERASE 245 447 - -
Tsu07g03934 451 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 446 - -
Tsu07g03934 451 CDD GT1_Gtf-like 1 433 IPR002213 GO:0008194
Tsu07g03934 451 PANTHER GLYCOSYLTRANSFERASE 245 447 - -
Tsu07g03934 451 ProSitePatterns UDP-glycosyltransferases signature. 312 355 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03934 Tsu-Chr7 45462198 45463631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03934 1 447 Glycosyltransferase AT2G36780 46.512 3.78e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03934 K13496 - gmx:100820150 605.52