Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03933 ATGGAATCCGAAGTTCCAAAGCTCCACTTAGTATTGTTTCCAATGATGGCACAAGGTCACATGAATCCCATGATGGATATTGCAAAAATATTGGCACAACATCACAATGTTAATGTTACAATAGTAACCACTCCACAAAATGCATCACGTTTCTCATCAATTCTATCACGTTATCTTCACATTCAAGTAATTCAAATCCAATTTCCATCTAAAGAGTTTGGATTACCAGATGGGTGTGAGAATCTTGACATGTTACCTTCACTTGGCACAGCTTCAAACTTCTTCATTGCAACAAAATTTCTACAACAAGAAGTTGAAAAGCAATTTGAAGAGTTAACAATATCACCAACTTGCATAATTTCAGATATGTGTTTGCCATATACAATTCATATAGCTAGAAAGTTCAATATTCCAAGAATTTCTTTTGTTGGAGCAAGTTGCTTCTATCTCTTGGTTGTGTATCATTTATATGTCACTAATATGAATGAAACTATGGCTAATAATGAAAATGAGTACTTTGTTTTGCCCGGTATCCCCGACAAAATTGAAATGACCATAGCACAAGCAGGAGTAGGATTTAAGGGTGAAGCTTGGAAACAATTTAATGATGATATTCTTGAAGCCGAAATGGGTACTTATGGGATACTCATGAACTCTTTTGAAGAATTGGAACCAACGTATGCAAGGGAATATAATAAGGTAAAACATGATAAGGTTTGGTGTATTGGTCCTGTTTCACTTAGTAACACTGATTATTTGGATAAGTTTCAAAGAGGTAATAAGAATAAGGATTCAATTGATGATGAATGGAAGCACATGAAGTGGCTTGATTCTCACAAAGAAGGGAGTGTTATCTATGCAAACCTTGGAAGTTTATGCAATATAACACCAACACAAATGATAGAGCTTGGTTTAGCATTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATAAGAGATGGAAATCATATAGAAGCATTGGAAAAATGGGTTGAGGAAAGTGGATTTGAAGGAAGAATCAATGGTAGAGGCCTAGTAATTAAAGGTTGGGCACCTCAATTATTGATATTGTCGCATCTTTCAACCGGAGGATTCTTGACGCATTGTGGTTGGAATTCTACTATTGAAGCAATATGTGCCGGTGTACCGATGGTTACATGGCCACTTTTTGCTGATCAATTTTTGAATGAGACTTTAGCTGTGGAAATATTGAAAGTTGGTGTGAAAATTggggtggagagtcctttgaaATGGGGTGAGGAAGAGGAAAGTAGTGTGTTGGTGAAGAAAGAAGCTATCATTAGTGGAATAGTAAGATTAATGGATGAGTCAAGTGAAAGTAAACAAAGAAGGAAAAAGATTAGAGAGCTTGCTAATATGGCTAAAAAGGCAGTAGAAAAAGATGGATCTTCTGATTCTAATGTTACTTTGTTCATCCAAGATATCATACAAAAAAGTAAGGATATGATTCAAGGAACAGGAACAGAGAAGTTGAAGGAAATTGAGGAGAAAATGTATGATGCTGAAAATGTGAATCATGTCATCTTAACTTGA 1554 0.3475 MESEVPKLHLVLFPMMAQGHMNPMMDIAKILAQHHNVNVTIVTTPQNASRFSSILSRYLHIQVIQIQFPSKEFGLPDGCENLDMLPSLGTASNFFIATKFLQQEVEKQFEELTISPTCIISDMCLPYTIHIARKFNIPRISFVGASCFYLLVVYHLYVTNMNETMANNENEYFVLPGIPDKIEMTIAQAGVGFKGEAWKQFNDDILEAEMGTYGILMNSFEELEPTYAREYNKVKHDKVWCIGPVSLSNTDYLDKFQRGNKNKDSIDDEWKHMKWLDSHKEGSVIYANLGSLCNITPTQMIELGLALEATKRPFIWVIRDGNHIEALEKWVEESGFEGRINGRGLVIKGWAPQLLILSHLSTGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNETLAVEILKVGVKIGVESPLKWGEEEESSVLVKKEAIISGIVRLMDESSESKQRRKKIRELANMAKKAVEKDGSSDSNVTLFIQDIIQKSKDMIQGTGTEKLKEIEEKMYDAENVNHVILT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03933 517 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 397 IPR002213 GO:0008194
Tsu07g03933 517 Gene3D Glycogen Phosphorylase B; 1 267 - -
Tsu07g03933 517 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 485 - -
Tsu07g03933 517 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Tsu07g03933 517 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 484 - -
Tsu07g03933 517 Gene3D Glycogen Phosphorylase B; 271 466 - -
Tsu07g03933 517 CDD GT1_Gtf-like 8 464 IPR002213 GO:0008194
Tsu07g03933 517 PANTHER GLYCOSYLTRANSFERASE 7 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03933 Tsu-Chr7 45454210 45455763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03933 1 484 Glycosyltransferase AT2G36750 51.738 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03933 K13496 - gmx:100527132 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03933 07 45454210 45455763 Tsu07g03933 07 45454210 45455763 ECH