Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03930 ATGGAATCCGAAGATCCAAAGCTCCACTTTGTATTGTTTCCAATGATGGCACAAGGTCACATGAATCCCATGATGGATATTGCAAAAATATTAGCACAACATCACAATGTTAATGTTACAATAGTAACCACTCCACAAAATGCATCACGTTTCTCATCAATTCTTGCACGTTATCTTCACATTCAGGTAATTCAACTCCATTTTCCATCTAAAGAGTTTGGATTACCAGATGGGTGTGAGAATCTTGACATGTTACCTTCACTTGGTATAGCATCAGATTTCTTCAATGCTTCAAGATCTCTAAAACAAGAAGCTGAAAAGCTATTTGAAGAGTTAACACCATCACCAACTTGCATAATTTCAGATATGTGTTTGCCATATACAATCCATATAGCTAGAAAGTTCAATATTCCAAGAATTTCTTTTGTTGGAGTAAGTTGCTTATATCTATTGTCTTGGCATAACTTACACGTCAGTAATATGAATGAAATTATGGCTAATAATGAAAATGAGTACTTTGTTTTGCCTGGTATCCCTGACAAAATTGAAATGACCATTGCACAATTAGGAGCAGGAAATAAGGGTGAAGCTTGGAAACAATTTAGTGAAGATGTGCTTGAAGCTGAAATGAGTACTTATGGGGTAATCATGAATTCTTTTGAAGAATTGGAACCAACGTATGCAAAGGAATATAAAAAGGTAAGAAATGACAAGGTTTGGTGTATTGGTCCTGTTTCACTTAGTAACACTGATTATTTGGATAAGTTTCAAAGAGGTAATAAGAATAAGGATTCAATTGATGATGAATGGAAGCACATGAAGTGGCTTGATTCTCAGAAACAAGGGAGTGTTATCTATGCAAGCCTTGGAAGTTTATGCAATATAACACCAACACAAATGATAGAGCTTGGTTTAGCATTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATAAGAGATGGAAATCAATTAGAAGCATTGGAAAAATGGGTTGAGGAAAGTGGATTTGAAGAAAGAATCAATGGTAGAGGCTTAGTGATTAAGAGTTGGGCTCCTCAGTTATTGATATTGTCGCATCCTTCAATCGGAGGATTCTTGACGCATTGTGGTTGGAATTCTACTATTGAAGCAATATGTGCTGGTGTACCGATGGTTACGTGGCCACTTTTCGCTGATCAATTTTTAAATGAGACTTTAGCTGTGGAAATATTGAAAGTTGGTGTGAAAATTggggtggagagtcctttgaaATGGGGTGAGGAAGAGGAAAGTAGTGTGTTGGTGAAGAAAGAAGCTATCATTAGTGGAATAGAAAGATTAATGGATGAGTCAATTGAAAgtaaagaaagaaggaaaaagatTAGAGAGCTTGCTAATATGGCTAAAAAGGCTATAGAAAAAGATGGATCTTCTGATTCTAATGTTACTTTGTTTATCCAAGAtatcatacaaaaaaataaggatATGATTCAAGGAACAAGAACAGAGGAGTTGAAGGAAATTGAGGAGAAAATGCATGATGCTGAAATAAAGTCAAATGGTGCAatcataaacacttgtgagtaG 1566 0.3372 MESEDPKLHFVLFPMMAQGHMNPMMDIAKILAQHHNVNVTIVTTPQNASRFSSILARYLHIQVIQLHFPSKEFGLPDGCENLDMLPSLGIASDFFNASRSLKQEAEKLFEELTPSPTCIISDMCLPYTIHIARKFNIPRISFVGVSCLYLLSWHNLHVSNMNEIMANNENEYFVLPGIPDKIEMTIAQLGAGNKGEAWKQFSEDVLEAEMSTYGVIMNSFEELEPTYAKEYKKVRNDKVWCIGPVSLSNTDYLDKFQRGNKNKDSIDDEWKHMKWLDSQKQGSVIYASLGSLCNITPTQMIELGLALEATKRPFIWVIRDGNQLEALEKWVEESGFEERINGRGLVIKSWAPQLLILSHPSIGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNETLAVEILKVGVKIGVESPLKWGEEEESSVLVKKEAIISGIERLMDESIESKERRKKIRELANMAKKAIEKDGSSDSNVTLFIQDIIQKNKDMIQGTRTEELKEIEEKMHDAEIKSNGAIINTCE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03930 521 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 397 IPR002213 GO:0008194
Tsu07g03930 521 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 486 - -
Tsu07g03930 521 Gene3D Glycogen Phosphorylase B; 1 267 - -
Tsu07g03930 521 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Tsu07g03930 521 Gene3D Glycogen Phosphorylase B; 270 466 - -
Tsu07g03930 521 PANTHER GLYCOSYLTRANSFERASE 7 486 - -
Tsu07g03930 521 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 484 - -
Tsu07g03930 521 CDD GT1_Gtf-like 8 464 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03930 Tsu-Chr7 45436551 45438116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03930 6 484 Glycosyltransferase AT2G36750 52.795 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03930 K13496 - gmx:100527132 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03930 07 45436551 45438116 Tsu07g03930 07 45436551 45438116 ECH