Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03928 ATGGTAACCCAAAATCAAAAGCTCCATTTTGTATTATTCCCAATGATGGCACAAGGTCACATGATTCCTATGATAGACATAGCAAAAATATTAGCACAACATAACAATGTTGTTACAATAGTAACCACACCACAAAATGCATCACGTTACACATCAACCATAGAACGTTATATTGAATCTGGTTTACacattcaattatttcaaaTCCAATTTCCATGTAAAGAATTTGGATTACCAGAAGGGTGTGAGAATCTTGACATGTTACCTTCACTTGGTATAGCATCTGATTTCTTCAATGCTTCAAGATTTCTAAGACAGGAAGCTGAAAAGTTATGTGATGAGTTAAAACCATCACCAAGTTGCATAATTTCAGATATGTGTTTGCCATATACAATCCATATAGCTAGAAAATTCAATATTCCAAGAATTTCTTTTGTTGGAACAGGTTGCTTATATGTCTTGGCTTTGCATAATATACATGCTTATAATGTGATGCAAATTATGGCTAATAAGGAACATGAGTACTTTGATTTGCCTGGTATTtctgaaaaaattgaaataactaTGGCACAAACAGGACTAGGATTAAAGGGTGAAGCTTGGAATgaatttaatattgatttggGTGAAGCTGAAATGGGTTCTTATGGAATAATAGTAAATTCTTTTGAAGAGTTAGAGCCATCATTTGTGAAAGATTATAAAAAAGCAAACAATGATAAAGTTTGGTGTATTGGTCCTGTTTCACTTAGTAACACTGATTACTTGGATAAGGGACAAAGAGGTAATAATAAGGTTTCAAGTGGTGAATGGAAGCACATGAAGTGGCTTGATTCTCAGAAAGAAGGGAGTGTAATCTATGCAAGCCTTGGAAGTTTATGCAATATAACACCAACACAAATGATAGAGCTTGGTTTAGCTTTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATAAGAGATGGAAATCAATTAGAAGCATTGGAAAAATGGGTTGAGGAAAGTGGATTTGAAGGAAGAATCAATGGTAGAGGCTTAGTGATTAAGAGTTGGGCTCCTCAGTTATTGATATTGTCGCATCCTTCAACCGGAGGATTCTTGACGCATTGTGGTTGGAATTCTACTATTGAAGCAATATGTGCTGGTGTACCGATGGTTACGTGGCCACTTTTCGCTGATCAATTTTTGAATGAGACTTTAGCTGTGGAAATATTGAAAGTTGGTGTGAAAATTGGGGTGAAGAGTCCTATGAAATGGGGTGAGGAAGAGGAAAGTAGTGTGTTGGTTAAGAAGGAAGATATCATTAGAGGTATTGAAAGATTAATGGATGAGTCAAGTGAGagtgaagaaagaagaaaaaagattaGAGAGCTAGCCAATATGGCTAAAAAGGCTGTTGAAAAAGATGGATCTTCTCATTCTAATGTTACTTTGTTCATCCAAGAtatcatacaaaaaaataaagatataattCAAGGAATAGGGACAGAGGAATTAAAGGAATTTGAGGAGAAATTGTACGATGCTGAAATAAAGTCAAATGGTGCAATCTTAAACACTTCTGAGGAGTTGGAGAAAGAATATGTGAAGGATTACAAGATGGAAAGAAACGATGAGGTTTGTAGTGTTGGCAAAGAGAGGTGTTGA 1647 0.3382 MVTQNQKLHFVLFPMMAQGHMIPMIDIAKILAQHNNVVTIVTTPQNASRYTSTIERYIESGLHIQLFQIQFPCKEFGLPEGCENLDMLPSLGIASDFFNASRFLRQEAEKLCDELKPSPSCIISDMCLPYTIHIARKFNIPRISFVGTGCLYVLALHNIHAYNVMQIMANKEHEYFDLPGISEKIEITMAQTGLGLKGEAWNEFNIDLGEAEMGSYGIIVNSFEELEPSFVKDYKKANNDKVWCIGPVSLSNTDYLDKGQRGNNKVSSGEWKHMKWLDSQKEGSVIYASLGSLCNITPTQMIELGLALEATKRPFIWVIRDGNQLEALEKWVEESGFEGRINGRGLVIKSWAPQLLILSHPSTGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNETLAVEILKVGVKIGVKSPMKWGEEEESSVLVKKEDIIRGIERLMDESSESEERRKKIRELANMAKKAVEKDGSSHSNVTLFIQDIIQKNKDIIQGIGTEELKEFEEKLYDAEIKSNGAILNTSEELEKEYVKDYKMERNDEVCSVGKERC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03928 548 CDD GT1_Gtf-like 8 465 IPR002213 GO:0008194
Tsu07g03928 548 Gene3D Glycogen Phosphorylase B; 274 467 - -
Tsu07g03928 548 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 485 - -
Tsu07g03928 548 PANTHER GLYCOSYLTRANSFERASE 7 487 - -
Tsu07g03928 548 PANTHER GLYCOSYLTRANSFERASE 496 544 - -
Tsu07g03928 548 Coils Coil 438 458 - -
Tsu07g03928 548 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 398 IPR002213 GO:0008194
Tsu07g03928 548 Gene3D Glycogen Phosphorylase B; 1 273 - -
Tsu07g03928 548 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Tsu07g03928 548 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 487 - -
Tsu07g03928 548 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 496 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03928 Tsu-Chr7 45424971 45426617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03928 8 485 Glycosyltransferase AT2G36750 52.510 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03928 K13496 - gmx:100777426 638.262