Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03927 ATGGGTTTGCAAGCAAACATTAATGTTCCACACTTTGTACTATTTCCCTTAATAGCACAAGGTCACATTATCCCAATGATAGACATAGCAAAACTCTTAGCACAACATGGTGCCATTGTTACCATATTCACTACACCAAAAAATGCTTCACGTTTTACTTCAGTTCTTTCTCGTGCTATTTTCAATGGCCTTCAAATCAAACTAATAACCCTAAATTTTCCATCAAAACAAGCCGGATTACCCGACGGTTGCGAGAATTTTGATATGGTTACCATTTCACAAGACATGATGTACAATCTTTTCAAAGCAGTTTCTTTGCTTCATAAACAAGCAGATGAACTGTTTGATAAATTGTCACCAAAACCAAATTGCATTATCTCTGATTTTTGCATTCCATGGACTTCTCAAATTGCTGAAAAACATCATATTCCTAGAATTTCATTTCATGGATTTTCTTGTTTCTGTCTTCATTTCTTGTTTAAGgtatttacttcaaatattcttgaAAGTATCAATTCAGATTCTGAGTTTTTCTCTGTTCCTGATATACCTGATCAAATTCAAGTCACCAAAGAGCAGATTCCAGGAGCAGTAAAACAGGAAAATCTAAAGGAATTTGCTGAGAAAATTCATGAAGCTGGATTGAAATCATATGGTGAAATCATAAACAGTTTTGAGGAGTTAGAGAAAGAATATGTTAAGGATTACAAAAAGGTAAGAAATGATAAGGTTTGGTGTGTTGGTCCTGTTTCACTTTGTAACAAAGATGGTTTAGATAAAGCTCAAAGAGGTAACATAGCTTCAATAAGTGAAAATAATTGTTTAAAGTTTCTAGATTTACATAAGCCAAAATCTGTTGTTTATGTTTGTCTTGGAAGTTTATGTAACTTAATTTCTTCACAACTTATTGAATTGGCTTTGGGATTAGAATCAACAAAAAAGCCATTTATTTGGGTTATTAGAGATGGAATTGGTAAAAGTGAAGAGTTGGAAAAATGGATTAGTGATGAAAAATTTGAGGAAAGGAATAAAGGTAGAGGATTAATAATTAGAGGGTGGGCCCCACAAATGGTGATTTTGTCACATGCTTCGATTGGTGGATTCTTGACACATTGTGGTTGGAATTCGGCACTGGAAGGGATAAGTTTTGGTGTTCCGATGATAACTTGGCCGTTATTTGCTGATCAATTTTTGAATGAGAAACTTGTTACTCAAGTTTTGAGGATTGGTGTGAGTCTTGGTGTTGAGGTTCCATTGAAGTGGGGAGAGGAAGAGATGTTAGGTGTGGTTGTGAAGAAAGAAGGTATTAAGGAGGCAATATGTAATGTGATGGATGAAGAGGGAGAAGAGAgtaaagagagaagagaaagggCTAGTGAACTTAGTGAGATTGCAAAAAGTGCTATTGAAAAAGGTGGATCTTCTTATCTTAATATTACTTTGCTTATACAAGATATCATGCAACTAAGCACCAAAGTTGAAACTTGA 1488 0.3374 MGLQANINVPHFVLFPLIAQGHIIPMIDIAKLLAQHGAIVTIFTTPKNASRFTSVLSRAIFNGLQIKLITLNFPSKQAGLPDGCENFDMVTISQDMMYNLFKAVSLLHKQADELFDKLSPKPNCIISDFCIPWTSQIAEKHHIPRISFHGFSCFCLHFLFKVFTSNILESINSDSEFFSVPDIPDQIQVTKEQIPGAVKQENLKEFAEKIHEAGLKSYGEIINSFEELEKEYVKDYKKVRNDKVWCVGPVSLCNKDGLDKAQRGNIASISENNCLKFLDLHKPKSVVYVCLGSLCNLISSQLIELALGLESTKKPFIWVIRDGIGKSEELEKWISDEKFEERNKGRGLIIRGWAPQMVILSHASIGGFLTHCGWNSALEGISFGVPMITWPLFADQFLNEKLVTQVLRIGVSLGVEVPLKWGEEEMLGVVVKKEGIKEAICNVMDEEGEESKERRERASELSEIAKSAIEKGGSSYLNITLLIQDIMQLSTKVET 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03927 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 488 - -
Tsu07g03927 495 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Tsu07g03927 495 PANTHER GLYCOSYLTRANSFERASE 6 492 - -
Tsu07g03927 495 CDD GT1_Gtf-like 10 468 IPR002213 GO:0008194
Tsu07g03927 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 284 406 IPR002213 GO:0008194
Tsu07g03927 495 Gene3D Glycogen Phosphorylase B; 275 470 - -
Tsu07g03927 495 PANTHER GLYCOSYLTRANSFERASE 6 492 - -
Tsu07g03927 495 Gene3D Glycogen Phosphorylase B; 8 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03927 Tsu-Chr7 45415784 45417451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03927 11 490 Glycosyltransferase AT2G36800 55.670 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03927 K13496 K22771 lja:Lj1g3v4690420.1 726.087