Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03921 ATGGCGGTAACTTCAACATCACTCGTTTCTCAACTCTCTATTGGCCTCCGCCGTCACCCTTCCCCAAAGCTCGATTCTCTCTCTCCTACAACCTCCTTCTTCGATTCAAATCTCCGTTTATCCGTCTCTTCCTCCAAACCCTCCCGAACCGTTATCGCCATGGCCGGCTCCGGCAAGtTCTTTGTTGGTGGCAATTGGAAGTGTAATGGAACAAAAGACTCCATCAGCAAGCTTATCTCTGACTTGAACAGTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTTGCACCTCCCTTTGTGTACATCGATCAGGTGAAAAACTCAATTACTGATAGGATTGAAATATCTGCCCAGAATTCTTGGGTAGGAAAAGGTGGTGCTTTCACAGGAGAAATCAGTGTGGAACAACTAAAAGACCTTGGATGCAAGTGGGTTATTCTCGGACATTCTGAGCGAAGGCATGTTATTGGAGAAAAGGATGAGTTTATAGGAAAGAAAGCTGCCTATGCTTTGAGCGAGGGTCTTGGAGTGATTGCATGCATTGGGGAATTGTTAGAAGAAAGAGAAGCTGGGAAAACTTTTGATGTCTGTTTCCAGCAATTGAAGGCTTATGCAGATGCGGTGCCTAGTTGGGATAATATTGTTATTGCATATGAACCTGTATGGGCCATCGGAACCGGCAAAGTGGCCTCTCCCGAGCAAGCTCAGGAAGTACACGTAGCTCTTCGAGATTGGCTTAAAAATAATGTCTCAGCTGAAGTCGCATCTAAAACACGAATTATTTATGGAGGATCTGTAAATGGAGGAAACAGTTCTGAGCTTGCAAAGAAAGAAGATATTGACGGGTTTCTTGTTGGCGGTGCTTCATTAAAGGGTCCCGAGTTCGCCACCATTGTCAATTCAGTCACATCGAAGAAAGTAGCGGCTTGA 930 0.4505 MAVTSTSLVSQLSIGLRRHPSPKLDSLSPTTSFFDSNLRLSVSSSKPSRTVIAMAGSGKFFVGGNWKCNGTKDSISKLISDLNSAKLEPDVDVVVAPPFVYIDQVKNSITDRIEISAQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGKVASPEQAQEVHVALRDWLKNNVSAEVASKTRIIYGGSVNGGNSSELAKKEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03921 309 TIGRFAM tim: triose-phosphate isomerase 61 291 IPR000652 GO:0004807
Tsu07g03921 309 Hamap Triosephosphate isomerase [tpiA]. 58 301 IPR022896 GO:0004807|GO:0006096
Tsu07g03921 309 Pfam Triosephosphate isomerase 61 301 IPR000652 GO:0004807
Tsu07g03921 309 SUPERFAMILY Triosephosphate isomerase (TIM) 57 302 IPR035990 GO:0004807
Tsu07g03921 309 PANTHER TRIOSEPHOSPHATE ISOMERASE 1 307 IPR000652 GO:0004807
Tsu07g03921 309 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 1 307 - -
Tsu07g03921 309 CDD TIM 60 300 IPR000652 GO:0004807
Tsu07g03921 309 Gene3D Aldolase class I 40 308 IPR013785 -
Tsu07g03921 309 ProSitePatterns Triosephosphate isomerase active site. 217 227 IPR020861 GO:0004807
Tsu07g03921 309 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 59 301 IPR000652 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03921 Tsu-Chr7 45334766 45339679 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03921 K01803 - gmx:100799358 528.094