Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03898 ATGCCTGCAACTCCATTTTCACGTTCGTTCTTCGTTTCACAACCGCGTTTCAATTACTACATTACCCCTATCTTTCGTTCACTAACCTATCAACTCTCTTCTTCACCGTTCCAATTCAATGCCAAATCCTCCACCGTCAGATTCCACTGTGCACTCTCACAAGCCGCAGAGACAGACTCTCCAACCGGCGGCCGGTCTGGTGCGTTAACTCCTAATCCTACGGTCACCGGAGAAGTTCAGAAAATCGACGTCAATCCTCCCAAGGGTACACGTGACTTCCCGCCTGAAGAAATGCGATTGCGTAATTGGCTATTCaataatttcaaagagGTGTCGCGGTTGTATGGGTTTGAGGAGATTGATTTTCCGGTTCTTGAGTCGGAAGCATTGTATACTAGGAAAGCAGGGGAGGAGATTAAGGACCAGCTTTACTGTTTTGAAGATCGGGGTAATCGCCGTGTTGCGTTGAGGCCTGAACTTACTCCTTCTTTAGCAAGGCTGGTGATACAGAAAGGgAAGTCCGTATCACTACCATTGAAGTGGTTCACCGTTGGACAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGTCGTCGTGAACACTACCAGTGGAATATGGATATCATTGGTGTTCCTGGGGTTATGGCTGAAGCAGAGCTTATATCTTCCATTGTTACTTTCTTCAAACGAATAGGAATTACAGAATCAGACGTTGGATTTAAGGTTTCTAGTCGAAAGGTTCTACAAGAAGTATTGAAGTGTTATTCAATACCTGAAAATATGTTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAAATTCCAGTTGACGAGATAAAAAAAGAGTTGAAAACTGTTGGTCTATCGGAGGAGGCTGTCCAGGAGCTATTGCAAGTCCTTTCTGTAAAGTCATTGACCGAGTTAGAAGAGAGGCTCGGAGGCAGTGGGGAAGCAATTGCTGATCTCAAACAGCTATTCTCACTGGCTGAAAAGTTTGGTTACTCCAAATGGCTTCAATTTGATGCATCAGTTGTTCGTGGCCTTGCTTATTACACTGGCATTGTATTTGAgGGTTTTGACCGAGAAGGAAAGCTCCGAGCTATCTGTGGCGGTGGCCGATATGATCATTTGTTCTCAACTTTTGGTGCTGATGACATTCCTGCGTGTGGTTTTGGATTTGGCGATGCAGTCATAGTCGAAGTAAGTCTATAA 1215 0.4428 MPATPFSRSFFVSQPRFNYYITPIFRSLTYQLSSSPFQFNAKSSTVRFHCALSQAAETDSPTGGRSGALTPNPTVTGEVQKIDVNPPKGTRDFPPEEMRLRNWLFNNFKEVSRLYGFEEIDFPVLESEALYTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELISSIVTFFKRIGITESDVGFKVSSRKVLQEVLKCYSIPENMFGKVCVIIDKIEKIPVDEIKKELKTVGLSEEAVQELLQVLSVKSLTELEERLGGSGEAIADLKQLFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIPACGFGFGDAVIVEVSL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03898 404 MobiDBLite consensus disorder prediction 57 91 - -
Tsu07g03898 404 Gene3D Bira Bifunctional Protein; Domain 2 80 403 IPR045864 -
Tsu07g03898 404 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 89 404 IPR006195 -
Tsu07g03898 404 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 80 402 - -
Tsu07g03898 404 CDD HisRS-like_core 97 402 IPR041715 -
Tsu07g03898 404 Pfam Histidyl-tRNA synthetase 89 393 IPR041715 -
Tsu07g03898 404 PANTHER HISTIDYL-TRNA SYNTHETASE 80 402 IPR004516 GO:0005737
Tsu07g03898 404 SUPERFAMILY Class II aaRS and biotin synthetases 86 400 IPR045864 -
Tsu07g03898 404 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03898 Tsu-Chr7 45114347 45120953 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03898 K01892 - gmx:100793186 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03898 07 45114347 45120953 Tsu07g03898 07 45114347 45120953 ECH