Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03897 ATGGTTCAGAAAGAAGAAGCCGATCACAAAAACGACGCTCTCCCCTCTGCCGTTTTCAAATTAGACTTACATTGCGAAGGAtgcatcaaaaaaatcaaacgcTCCGTTCTCCATTTAGATGGTGTGGAAGATGTTAAGGTAGATATGCCTGGTAACAAAGTGACGGTTATTGGAAAAGTGGATCCTCACAAGGTTCGTGATAAACTGGCGGACAAAATTAAGAAGACGGTTGAGATCGTTTCATTTCCGTCTCCGCCGAAAAAGGATGTTGCCGGCGATAAACCACAGCCGGAGAAAAAGAAACcagaagaggagaagaagaataagCCTGATGACAAAAAATCTGATGATAttaaaattgaggaaaaatCTCCTAAACAGTCGGTTCAAAACACGGTGGTTTTGAAAATTAGATTACACTGTGACggttgtattaaaaaaattgaaaagattaTCCTCAAAATCAAAGGAGTTGAATCAGTGAACAGTGATTTAGGAAAAGATTTGGTGACAATAAAAGGAATAATTGAAGCAAAAGAAATTGTACCTTATTTGACAGAAAAATTCAAGAGGACTGTGGAGGTGGTTCAACCTAAGAAAGAAGATggtaaaaataaagagaaagatgatgggaaacaaaaatcaaaagaaaatcaagGTGGCGGAGGTGGCGGCGGTGATAAAATAGAGGAAGTTGCAACAAAAATGGAGGTTAATAAAATGGAGCATTATGGTTACGGACACCAACCACCTATGTATTGGTATGATGGATATGAACCAGGTCAAAGTAGCAACCACACAGTGGAGGTTCAACAAGGGTATCCTAATCAACAAGGAtattatgattataataatCATGTGAATGAACATGAACAAGGGTACAGTTATAATGGACAAGGGTATGGTTATAATAATCATGTGAATCAAGCTCAAGGTGGATATATGGTAGAgcctcaacaacaacaaccatttTATATGCATCCAAATCATCCTCCTCCACAAATGTTTAGTGATGAAAACCCTAATGCATGTTCCTTAATGTGA 1044 0.3314 MVQKEEADHKNDALPSAVFKLDLHCEGCIKKIKRSVLHLDGVEDVKVDMPGNKVTVIGKVDPHKVRDKLADKIKKTVEIVSFPSPPKKDVAGDKPQPEKKKPEEEKKNKPDDKKSDDIKIEEKSPKQSVQNTVVLKIRLHCDGCIKKIEKIILKIKGVESVNSDLGKDLVTIKGIIEAKEIVPYLTEKFKRTVEVVQPKKEDGKNKEKDDGKQKSKENQGGGGGGGDKIEEVATKMEVNKMEHYGYGHQPPMYWYDGYEPGQSSNHTVEVQQGYPNQQGYYDYNNHVNEHEQGYSYNGQGYGYNNHVNQAQGGYMVEPQQQQPFYMHPNHPPPQMFSDENPNACSLM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03897 347 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 4 347 - -
Tsu07g03897 347 MobiDBLite consensus disorder prediction 199 216 - -
Tsu07g03897 347 Pfam Heavy-metal-associated domain 19 76 IPR006121 GO:0046872
Tsu07g03897 347 Pfam Heavy-metal-associated domain 136 194 IPR006121 GO:0046872
Tsu07g03897 347 Gene3D - 15 85 - -
Tsu07g03897 347 Gene3D - 127 202 - -
Tsu07g03897 347 MobiDBLite consensus disorder prediction 91 124 - -
Tsu07g03897 347 SUPERFAMILY HMA, heavy metal-associated domain 131 187 IPR036163 GO:0046872
Tsu07g03897 347 ProSiteProfiles Heavy-metal-associated domain profile. 139 172 IPR006121 GO:0046872
Tsu07g03897 347 SUPERFAMILY HMA, heavy metal-associated domain 19 71 IPR036163 GO:0046872
Tsu07g03897 347 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 347 IPR044594 GO:0046872
Tsu07g03897 347 ProSiteProfiles Heavy-metal-associated domain profile. 23 86 IPR006121 GO:0046872
Tsu07g03897 347 MobiDBLite consensus disorder prediction 82 125 - -
Tsu07g03897 347 MobiDBLite consensus disorder prediction 199 229 - -
Tsu07g03897 347 CDD HMA 23 76 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03897 Tsu-Chr7 45106068 45108674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03897 - - mtr:MTR_0041s0140 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03897 07 45106068 45108674 Tsu07g03897 07 45106068 45108674 ECH