Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03887 ATGGTTTTATATGACCATTCAGATGTTTACCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTAGTTATAATTTAGGGTACTATGACAACATAGTTCAACATGATACCAGTGACATCTATAATGGACACTACTACAATAGTCATTACGATAACGAGTGTAACCATGTCGAGAGTGATGAGATCCTTGCCCGTGCTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCAAGATATTTACAGGGAGGTGAAAATCAGTTTCATGTTACTGAGACCGAGCCATCATATGATTGGCATGATCCTTCAATGGTCAATTATTGTTCAGAAGGTCATGATTATGCACAAGAAGGAGTTGGTGATGTAGAAAGTTCATGTTCTAGTCCTCCTGAAACAGAGGAGTATTCGTTGGAGATAACCGACAATTATCCACTTGATGATGAAGTAGGGAAGAGATTGAGTCAAATGATACCTATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCTACATCAGATCATCAAAGGCTTCTGGATAGattGCAACTATATGACTTTGTGGAGAACAGGGTGCATGGTGATGGTAATTGTCAGTTCCGTGCACTGTCTGATCAATTGTATCATGCCCCTGAGCGCCACAAGTTTGTGAGAAGACATGTTGTCAATCAGCTCAAATCTAATCCGGAGATTTATGATGGATATGTTCCTATGGAATATGGTGACTATTTGGACAAGATGTCAAAgAGCGGAGAATGGGGTGATCATGTCACTCTTCAAGCTGCAGCAGATTCGTATGGTGTGAGAATATTCGTCATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTTCTGAGTTTTTGGGCAGAGGTGCATTATAATTCCATCTACCCTCAAGGAGATATAACTTCAAATGAGtcaagaaagaagaaaagatggtgGAGCTTTGGGAACAAGAATTAG 1014 0.3876 MVLYDHSDVYQWGLNLLDGDPSYNLGYYDNIVQHDTSDIYNGHYYNSHYDNECNHVESDEILARALQEEFSQLEIAESSRYLQGGENQFHVTETEPSYDWHDPSMVNYCSEGHDYAQEGVGDVESSCSSPPETEEYSLEITDNYPLDDEVGKRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVENRVHGDGNCQFRALSDQLYHAPERHKFVRRHVVNQLKSNPEIYDGYVPMEYGDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDITSNESRKKKRWWSFGNKN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03887 337 Gene3D - 173 322 - -
Tsu07g03887 337 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 26 333 - -
Tsu07g03887 337 PANTHER OTU DOMAIN CONTAINING PROTEIN 26 333 - -
Tsu07g03887 337 ProSiteProfiles OTU domain profile. 192 316 IPR003323 -
Tsu07g03887 337 SUPERFAMILY Cysteine proteinases 178 316 IPR038765 -
Tsu07g03887 337 Pfam OTU-like cysteine protease 199 284 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03887 Tsu-Chr7 45020975 45026389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03887 - - aip:107648617 573.548