Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03875 ATGGACACACGCAGTGTTGTTGAGATAAAAcattcaaagttcaaaagaaTTTGTGTTTTCTGTGGTAGTAGTCCTGGCAAAAAAACTACTTACCAAGATGCTGCCATTCAACTTGGCAATGAATTGGTTTCAAGGAACATTGATCTTGTGTATGGAGGTGGAAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGTGTTATTCCCAAGACACTCATGCCTCGAGAGCTAACTGGTGAAACAGTAGGAGAAGTAAAAGCTGTTGCTGATATGCATCAAAGAAAAGCTGAAATGGCTAAGCATTCAGATGCTTTCATTGCTTTACCAGGTGGATATGGTACTCTTGAGGAGCTTCTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCGGTTGGATTAGTAAATGTTGATGGATACTTTAACTCTTTGTTGTCATTCATTGACAAAGCTGTGGAAGAAGGATTTATTAGTCAAAATGCTCGCCACATTATTGTATCAGCACCAACTGCAAAAGAGTTAGTCAAGAATTTGGAGGATTATGTTCCATGTCATGAGGGTGTTGCTTCAAAGTTGAGCTGGCAGATGGAACAGCAGCTAGCATACCCTCAAGATTATGACATCTCAAGATAG 666 0.3964 MDTRSVVEIKHSKFKRICVFCGSSPGKKTTYQDAAIQLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISQNARHIIVSAPTAKELVKNLEDYVPCHEGVASKLSWQMEQQLAYPQDYDISR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03875 221 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 221 - -
Tsu07g03875 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Tsu07g03875 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
Tsu07g03875 221 Gene3D - 5 191 - -
Tsu07g03875 221 TIGRFAM TIGR00730: TIGR00730 family protein 15 192 IPR005269 GO:0009691|GO:0016787
Tsu07g03875 221 PANTHER LOG FAMILY PROTEIN YJL055W 7 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03875 Tsu-Chr7 44861351 44865550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03875 K22522 - gmx:100787375 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03875 07 44861351 44865550 Tsu07g03875 07 44861351 44865550 ECH