Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03865 ATGGCAAAGCTATTCAATTCTCTTCCTCTTTTCTTTCTCAACCTATTCATCATTGTGAcattgtttgaaacaatttcagCTCAAACAGCTGTATCTCCAGCACCATCAGGACCATTAAACATAACACAAGTCCTAGAAAAAGCAGGACAATTCACAACATTCATGAAACTACTCAAAGCGACACAAGTATCCGATCGAATCAATTCGCAACTCAATAACTCGAATCAAGGCCTAACAATCTTTGCACCAACAGATAATGCATTCTCAAGTCTAAAAGCAGGAACAATAAACTCAATTAGCACACAAGACCAACTTCAACTTTTGCAGTTTCATATTTTACCAACACTTTACACAATCTCACAGTTTCAAACTGCTAGTAACCCTTTACATACACAAGCTGGAAACAGTGATGATGGAGAGTATCCTCTTAATGTTACTACTTCTGGAAATCAAGTTAATGTAACTACTGGTGTGATTGAAACAACTGTTTCTAATACTATTTATAGTGATAACCAGCTTGCAGTTTATCAGGTTGATCAAGTGCTTCTTCCTATGGCACTTTTCGGACAAGCACCGACTGCTGCACCTGCCGAGGCTCCTGCGCCTACTAAGCCGGAGAAAAGTGTTAGGGCAGCTGGTGCTCCGAAAGGGTCTACGGATAGTCCGGCTGATGATTCAAGTGGTGCTGGTTTGAATGGCTATGCAGTTAATGGTATTGCATTGTTTGTTGCCAATGTTGTTTTGTCTTGTTTGTGGATGTAA 762 0.3924 MAKLFNSLPLFFLNLFIIVTLFETISAQTAVSPAPSGPLNITQVLEKAGQFTTFMKLLKATQVSDRINSQLNNSNQGLTIFAPTDNAFSSLKAGTINSISTQDQLQLLQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVIETTVSNTIYSDNQLAVYQVDQVLLPMALFGQAPTAAPAEAPAPTKPEKSVRAAGAPKGSTDSPADDSSGAGLNGYAVNGIALFVANVVLSCLWM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03865 253 MobiDBLite consensus disorder prediction 195 226 - -
Tsu07g03865 253 Gene3D FAS1 domain 20 185 IPR036378 -
Tsu07g03865 253 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 11 244 - -
Tsu07g03865 253 ProSiteProfiles FAS1/BIgH3 domain profile. 38 182 IPR000782 -
Tsu07g03865 253 SMART fasc_3 79 185 IPR000782 -
Tsu07g03865 253 Pfam Fasciclin domain 50 184 IPR000782 -
Tsu07g03865 253 SUPERFAMILY FAS1 domain 38 184 IPR036378 -
Tsu07g03865 253 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 244 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03865 Tsu-Chr7 44779182 44780303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03865 - - mtr:MTR_7g101080 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03865 07 44779182 44780303 Tsu07g03865 07 44779182 44780303 ECH