Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03850 atgggttcaTTAGAAAGGTCAAAGAAAAAAACTCATTTATGGAAAAAAGCAATGCTTCATTTTTCTCTATGCTTTGTGATGGGTTTTTTTACAGGTTTAGCTCCATCAGGtaaatctttaatttttcctagcaaaattgaaatttcagcCTCAAATGTAACAAAATTTGTAGCACCTCAACCTTctcaaatttcaacaaaaaatgttAACAAAAGTTGGATAGCATCAGCACCACAAATTCATAGCCAAAAAACAaaagcagcagcagcaacaacaacaacaaaattgcATGTAAAATCATTACCTCAATTGAAGCCTAAAAGACTTGTAATCATAGTAACACCAACAAGCACAAAACTACCTTatcaaaatgtttttttaagaaGGTTAGCAAATACTATCAAGCTTGTTGATCAACCATTGCTTTGGATTGTTGTCGAAGCGAAAACCGATTCGAAGGAATTGCCGGAAATATTAAGGAAAACTGGTATTATGTATAGACATGTTGTTTATAGTGAAGAGTTTATGGACTTAGAAGCTGAATTGAATCATCAGAGAAATTTAGCACTTGGTCACATTGAACATCATAGATTGAGTGGAATTGTTCATTTTGCTGGTCTTTCTAATGTTTATGATCTTCAATTCTTTCAACAGCTTAGAGATATTGAGGTCTTTGGGACATGGCCAACAGCACTATTACTTGCTAACAGAAAAAGAGTGATAATTGAAGGACCTGTATGTGACTCATCTAAAGTCATTGGATGGCATTTAAGGAATATGAACAATGAAACAATTACTTCTCCcattcatatttcaagttttgCATTCAATAGCTCTATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTAAAGACACTTCTCAGAATTCAATCAAGTTTGTGAAGCAAGTAGTACTAGAAGATGAGGCTAAGTTGAAGGGAATTCCACCAGAGGATTGCTCCAAAATCTTGCTATGGCgtttcaactttttttatgCACACACCATTTCCAATcactaa 1029 0.3042 MGSLERSKKKTHLWKKAMLHFSLCFVMGFFTGLAPSGKSLIFPSKIEISASNVTKFVAPQPSQISTKNVNKSWIASAPQIHSQKTKAAAATTTTKLHVKSLPQLKPKRLVIIVTPTSTKLPYQNVFLRRLANTIKLVDQPLLWIVVEAKTDSKELPEILRKTGIMYRHVVYSEEFMDLEAELNHQRNLALGHIEHHRLSGIVHFAGLSNVYDLQFFQQLRDIEVFGTWPTALLLANRKRVIIEGPVCDSSKVIGWHLRNMNNETITSPIHISSFAFNSSILWDPERWGRTSSVKDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFFYAHTISNH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03850 342 Pfam Glycosyltransferase family 43 130 332 IPR005027 GO:0015018|GO:0016020
Tsu07g03850 342 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 336 IPR005027 GO:0015018|GO:0016020
Tsu07g03850 342 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 334 IPR029044 -
Tsu07g03850 342 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 107 340 IPR029044 -
Tsu07g03850 342 CDD GlcAT-I 108 333 IPR005027 GO:0015018|GO:0016020
Tsu07g03850 342 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03850 Tsu-Chr7 44673937 44676922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03850 1 333 Glycosyltransferase AT2G37090 61.337 4.99e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03850 K20869 - gmx:100785607 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03850 07 44673937 44676922 Tsu07g03850 07 44673937 44676922 ECH