Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03805 ATGAAAATagaatcaaaaaaatcaaagTCATGGCCAAAATTAGCCGTGAAGAATTGGCTTAGTACAAAGAACAGTGCTGAAAAGTTTAACTCAGAATACTCTATTAAAGGCACTTCGACGGAAACTAGAAAGAGTTGTTCAGACCAAGATAGTTACATCCTCGTACCAGATAATTTCTCTGAAGGGTGGTTGAAGCATTCTACAAATGGCATGAAACGTTCGGTGCTTGGGGAGAAAAAACCTCCCTCCATCATCACAAATACTCTCAACCTTAGGGTGTTTGTGGGGACGTGGAATGTTGGGGGAAAGTCACCAAACAAAGGATTAGACTTAAGGAATTGGCTTACGTCTACTTTGCCAGCTGACATATATGTTAttggGTTCCAAGAAATTGTACCACTAAATGCTGGAAACGTGCTTGGGTCAGAAAACAGTGGCCCAGCAACAAAATGGTTGGCCTTTATTCATCAAGCCCTAAACACTACCAACAATGAAAGCCCAAATCAGAAGCAACGCTTTAGCTTAGTAGCAAGCAAGCAAATGGTTGGTATTTTCTTGTGTTTAAAAGTATCGCGCGTTGGCACCGGCATCATGGGCTATCTCGGAAATAAGGGTTCGATATCGATTAGCATGCGATTATTTCAAACCACGTTTTGCTTTGTTTGCACCCACTTGGCCTCTGGAGAGAAATGTGGTGACGAATTGCGAAGAAATATGGACATCTCTGAAATCTTGAAGAGAACTAAATTTTGTCACTCTTATAAATCAATTGGTCATTCAGTTCCTCCCGAAAGCATACTAGAACACGATAACATTATTTGGTTGGGCGATTTAAACTATCGACTAGCTGCTAGTTACGATGATATACACGAGCTACTAAAAGAGAATAATTTAAAGGCGTTACTCGAGAAGGATCAACTAAGGATTGAACAGAAAGCCGGAAGAATATTTGAAGGTTGGAATGAAGGAAGCATATGTTTTGCTCCTACTTACAAATACTTAACCAATTCAGATCAATATGTAGCACAAACCTGTAAATCCAAGGAAAAACGTCGCACCCCCGCTTGGTGTGATAGAATTTTATGGAAAGGAGAAGGATTAAATCAAAAAATGTATGTTAGAGGAGAATCAAAATTCTCTGATCATAGACCAGTTTATTCACTATTCACAGCACAAGTGGAAATGACAAACAAGAATCTCACACGTTCTGTTTCTTCAACCACTGTTTCAAGATCACCATGTCCCTTAAAACCATTCACAAATTCTGCTTCATTGTCATCAACATGTTGTGCTGCTGCAAAAGTACAAGCAGAAGAACAACTCATGTTACTAGCAACAAGGACACAAAGTTGCATAGATTCTGTTTCAAGATTCTTGTAG 1380 0.3877 MKIESKKSKSWPKLAVKNWLSTKNSAEKFNSEYSIKGTSTETRKSCSDQDSYILVPDNFSEGWLKHSTNGMKRSVLGEKKPPSIITNTLNLRVFVGTWNVGGKSPNKGLDLRNWLTSTLPADIYVIGFQEIVPLNAGNVLGSENSGPATKWLAFIHQALNTTNNESPNQKQRFSLVASKQMVGIFLCLKVSRVGTGIMGYLGNKGSISISMRLFQTTFCFVCTHLASGEKCGDELRRNMDISEILKRTKFCHSYKSIGHSVPPESILEHDNIIWLGDLNYRLAASYDDIHELLKENNLKALLEKDQLRIEQKAGRIFEGWNEGSICFAPTYKYLTNSDQYVAQTCKSKEKRRTPAWCDRILWKGEGLNQKMYVRGESKFSDHRPVYSLFTAQVEMTNKNLTRSVSSTTVSRSPCPLKPFTNSASLSSTCCAAAKVQAEEQLMLLATRTQSCIDSVSRFL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03805 459 Pfam Endonuclease/Exonuclease/phosphatase family 96 382 IPR005135 GO:0003824
Tsu07g03805 459 Gene3D Endonuclease/exonuclease/phosphatase 76 414 IPR036691 -
Tsu07g03805 459 SMART i5p_5 89 397 IPR000300 GO:0016791|GO:0046856
Tsu07g03805 459 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 166 442 IPR045849 GO:0004445|GO:0046855
Tsu07g03805 459 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 166 IPR045849 GO:0004445|GO:0046855
Tsu07g03805 459 SUPERFAMILY DNase I-like 83 406 IPR036691 -
Tsu07g03805 459 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 8 166 - -
Tsu07g03805 459 Coils Coil 290 310 - -
Tsu07g03805 459 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 166 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03805 Tsu-Chr7 44322251 44326907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03805 69 402 Acyl Lipid Metabolism Gene Families AT2G43900 28.894 6.41e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03805 - - gmx:100777569 616.69