Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03763 ATGACGAGAATTAATCCTAATCGTGATCGCGCCTCTAATTATAACTGCGGCAATGTCTTTAATTTGCTTGCACGGAGAGAGATTTCACCAAGGACAAAACATGTAGCAAGAGATGCAAAGCGTGGCCTCCTGTCATGGGTTGAGGCTGATTCACTGCGGCATTTGTCAGCTAAGTATTGCCCTTTATTACCTGCCCCAAGGTCTACTATTGCAGCAGCGTTTAGTCCAGATGGAAAAGTTCTTGCCTCTACGCATGGCGATCACACAGTAAAGATAATCGATTGTGAAACTGGACGATGCTTAAAGGTGTTAATTGGCCATATGAGGACGCCTTGGGTGGTTAGGTTCCATCCATTGCATCCGCAAATACTGGCCAGCGGGAGCTTGGATCAAGAAGTTCGATTATGGGATGCTAACACATCAGAGTGCATAACATCTCACCATTTCTATCGACCAATTGCATCCATTGCTTTTCATGCCAAAGGAGAAATAATTGCCGTTGCATCAGGCCACAAGCTCTACATATGGCACTATGACAAGAAAGGCGAAGCATCCTACTCACCAATTTTTGTGTTAAAGACAAGGCGGTCTCTACGGGCTGTGCATTTTCACCCTCATGCTGCGCCATATCTTTTAACTGCTGAGGTCAATGATCTTGACTGTTCAGATTCCTCGATGACAGAGGCAACATCTATTGGTTATTTACAATATCCTCCACCTTCCTTTTTTGTCACAAATGTTCAACCTGCGGAACATGTTACTTCGTCCAGTGATTCACCTAATGTGTCATTGCCTTTCTTCTTTGTTCCTTCATATGCTGTTGATGAGTCGAGAGAAGAATTACCGCATGCTAGTCATGACGTTGGCCCAGGGTCTGAGATGCCCACTAACTCTCCTGTGCACACTACTTTCTCTAATGGAATGGGAGTTGGCATCCGGAACCTCACAGTGGATGGTATGGAAACTGATGAAACCAGACCTGCTGAAGGAAGTCAACACAGAAACCCTACTGATGCAAGTTCTCTCAATGTTATGTTACATGGCCCATCTAGACAAACTGCAAATCGTGGAGTTCATTCAGAGGGTGGCCAATTTCATCAGTTTGTTTCTTCAAGAGATCCAAGTGGATGGGAATTACCTTTTCTACAAGGATATTTGATGGGTCAAAGCCAAGTTGGTATCCCTTCAATGCATTCTCACATGGGTGTTACTCGTGACACTCTAGCTCAACAGATTAGTTCTTCTGTAGCATCTAATAGTAATACTCTTTCCACTTCTAATGTTGATGTAGCAGTCCCATCTTCAGCAATGTCTGGCAGCATCAACATACCCGGATCTTCTAGAAGATCAGGTTTTCGGAGTCATGTATCACAACCACGTACACCTGTACCAGAATCTGGAAATCTCGCTGCTTCTATTAATACCCCACATGATGGATCTGACATCCAAACAATCATGAACCGGATTCAGTCAGAACTTGCTACATCCGGGGCACCTCAGCAGGGGGCTGCAGCGGCAGCTGCTGAGTTGCCTTGTACCGTGAAGTTAAGGGTATGGTCTCATGACGTAAAAAATCCATGTGCCCCACTAAATGCTGAAAGATGTCGTCTAACCATACCTCATGCTGTCCTCTGCAGTGAAATGGGTGCCCACTTTTCACCATGCGGTAGATATTTAGCTGCCTGTGTTGCATGTATGCTTCCACATATTGAAGCTGATCCAGGATTACAAACTCCTGTGCATCAAGAGCCTGGCATTGCAACATCACCAACTCGGCATCCAATATCAGCACACCAAGTTATGTATGAGCTGCGGATCTATTCCCTCGAGGAGGCAACATTTGGATTGGTGCTGGCTTCTCGAGCAATTAGAGCTGCCCATTGTCTGACTTCAATTCAGTTCTCACCTACATCTGAGCACATACTCCTTGCCTATGGTCGACGTCATTGTTCTCTTCTTAAAACCATTGTCATTGATGGAGAAACAACGTTACCTGTATATACAGTTTTAGAGGTATATAGAGTTTCGGATATGGAACTTGTTAGAGTGCTTCCTAGTGCTGAAGATGAGGTCAATGTGGCATGCTTTCATCCTTTTCCTGGAGGCGGGTTAGTTTATGGAACAAAGGAAGGAAAGCTCAGGATCCTCCACTATGATGGTGCTCACCCAGTGGATGGCACTGGACCAAGCTACTTTCCTGATGAGACGATCGTTGGAGTCAGTCAGTGA 2229 0.4513 MTRINPNRDRASNYNCGNVFNLLARREISPRTKHVARDAKRGLLSWVEADSLRHLSAKYCPLLPAPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPQILASGSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYDKKGEASYSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDCSDSSMTEATSIGYLQYPPPSFFVTNVQPAEHVTSSSDSPNVSLPFFFVPSYAVDESREELPHASHDVGPGSEMPTNSPVHTTFSNGMGVGIRNLTVDGMETDETRPAEGSQHRNPTDASSLNVMLHGPSRQTANRGVHSEGGQFHQFVSSRDPSGWELPFLQGYLMGQSQVGIPSMHSHMGVTRDTLAQQISSSVASNSNTLSTSNVDVAVPSSAMSGSINIPGSSRRSGFRSHVSQPRTPVPESGNLAASINTPHDGSDIQTIMNRIQSELATSGAPQQGAAAAAAELPCTVKLRVWSHDVKNPCAPLNAERCRLTIPHAVLCSEMGAHFSPCGRYLAACVACMLPHIEADPGLQTPVHQEPGIATSPTRHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHCSLLKTIVIDGETTLPVYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEGKLRILHYDGAHPVDGTGPSYFPDETIVGVSQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03763 742 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 63 720 IPR011047 -
Tsu07g03763 742 SMART WD40_4 677 717 IPR001680 GO:0005515
Tsu07g03763 742 SMART WD40_4 97 137 IPR001680 GO:0005515
Tsu07g03763 742 SMART WD40_4 56 94 IPR001680 GO:0005515
Tsu07g03763 742 SMART WD40_4 140 177 IPR001680 GO:0005515
Tsu07g03763 742 ProSiteProfiles Trp-Asp (WD) repeats profile. 104 146 IPR001680 GO:0005515
Tsu07g03763 742 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 292 741 - -
Tsu07g03763 742 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 36 291 - -
Tsu07g03763 742 MobiDBLite consensus disorder prediction 439 471 - -
Tsu07g03763 742 Gene3D - 41 226 IPR015943 GO:0005515
Tsu07g03763 742 Pfam WD domain, G-beta repeat 98 137 IPR001680 GO:0005515
Tsu07g03763 742 Pfam WD domain, G-beta repeat 71 94 IPR001680 GO:0005515
Tsu07g03763 742 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 292 741 - -
Tsu07g03763 742 MobiDBLite consensus disorder prediction 322 342 - -
Tsu07g03763 742 ProSitePatterns Trp-Asp (WD) repeats signature. 124 138 IPR019775 -
Tsu07g03763 742 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 36 291 - -
Tsu07g03763 742 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 104 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03763 Tsu-Chr7 43850761 43856897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03763 71 239 Miscellaneous Gene Families AT5G08390 24.176 9.28e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03763 - K17985 gmx:100817857 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03763 07 43850761 43856897 Tsu07g03763 07 43850761 43856897 ECH