Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03753 ATGGAGAGTGACGTGAAAAGTTTGAAATGGGCTTCAATTCAGCGACTTCCAACGGTTGCACGTTTAAGGAGAGGTCTATTGACTACCCCTCAAGGTGATACCAATGAAATTGACGTTCACAATATTGGCTTACAAGAAAGAACTTATTTGCTTCAAAGACTCGTCAAGAATAATATTAATACCGATGACGATGACGGCATGGACAATGATGATCAAAGTAGTTTCTTGTTGAAGCTTATGAGAGATCGCATTGATAGAGCTGGAGTTGATATTCCTACAATTGAAGTTCGATTTGAGCACTTGAATGTCCAATCACAGGTTCAAGTAGGAAAGAGAGCTTTGCCTACAATCACTAACTACATGCTTGACATTCTAGAGGCTCCATTGAAATATatactaagaagaagaaaaccaCATTTGAATATTCTAGAGGATGTCAGCGGAATAATAAAGCATAGCAGGATGACATTGCTTTTAGGCCCTCCAAGTTCTGGAAAGACCACACTTCTCTTGGCCTTGGCTGGAAAACTTGATCCCAACTTAAAGTTCACTGGAAAAGTGAGTTATAATGGTCATGAGATGAATGAATTTGTACCCCAAAGAACTGCTGCTTATGCCAGTCAAAATGATGTTCACCTTGGAGAATTGACTGTCAGAGAAACCTTGGCCTTCTCAGCAAAAGTTCAAGGCGTTGGACCTCGATATGATATACTAGCAGAGGTGTgtagaagagagaaagaagaaaacatTATCCCTGATCCAGATATTGATGTCTATATGAAGGCTGTTGCAACTGAGGACCAAAGAGCAAACATTGTAACGGAATATATTTTAAAGATTTTGGGACTGGATATCTGCGGAGATACTATGGTGGGAAATGCAACATTAAAAGACATCTCTAAAGGACAAAGGAAATGTGTTACTATAGGAGAGATGCTGGTAGGACCAATTAAAGCTTTGTTCATGGATGAAATATCTATTGGTTTGGATGACTCGACGACCTTTCAAATTGTGAAATCATTGAAGCAATTTGTCCACCTTCTTAAAAGAACTGCTGTGATCTCACTACAACAGCCATCACTAGAGACTTTCAATCTTTTTGATGACATTATTTTACTCTCTGATGGACACATTGTGTACCAAGGTCCTTGTGAACAAGTGCTTGGTTTTTTTGCTTCAATGGGTTTTATATGTCCCGAGAGGAAAACTGTTGTAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAACAATATtggatacaaaaagaaaagccTTATAGTTTTGTGACAGCTAAAGAGTTTGCGGACGCATTTGAGTTATATCATATTGGGAGAAGCCTTTTTAATGAACTTGCTACTCAATTTGACAAGTCTAAAAGCCATCCATCTGCTTTGACAACCAAAAAGTATGGCATTGGAAAATGGGAATTATTCAAAGCGTGCTTATCAAGAGAATATTTACTCATGAAGCGTAATTCACTTTACTATATCTTCAAACTTTGCCAAATTGCTTTGGTTGCCATCATCACCATGACTGTTTTCCTACCAACTCGAATGCATCATGATTCAGTGAGCGATGGAGGCATTTATGCTGGCGCATTATTATATGGAAGTACTGTACTTATGTTGAATGGATTTGCTGAACTTTCTATGATGGTTGTGAAGCTTCCTGTGTTTTATAAGCAAAGAGACCTACTCTTTTTCCCTTCATGGGCATATTCTGTTCCGTCATGGATCCTAAAAATCCCCATAAGTTTTGTGGAAGTAGGTATTTGGGTATCCTTCACCTATTCTATCATTGGTGATCCAAATGCTGTTGGATGGACATTCCTTCTTCTAGTGCTTGTCAACCAAATGGCTACTTTGTTTTGCCAATTAGTTGCTGCAATTAGTAGAGATATGGCAATGGCCGGGACTCTTGGGACGTTTTCATTGGGAATGCTTCTCGTTGCAGTGTCAAAAGACAATATAAGAAAGTGGTGGTTATGGGAATTCTGGATATCACCTGCTATGTATGGACAAAATGCCTTGTTGAATAACGAATTCCATGGGAAGACATGGAGACATGTTCCACCTAACTCAACGGAACCTCTAGgagttcaaattttgaaagcTCGCGGCTTCTTTACTCAGTCCTACTGGTATTGGATAGGTTTTGTGGTATTGATTGGATACACATTATTGTTCGTCTTTGGTCACATTCTTGCGCTTACTTTCTTGAACCCGCTTAAAGAACACCAGGTTGTTAAATTCGCTCGGTCGTTATCCAGGAAGCAAAAATTTGTAAGGGATAGTGAACAAAACCAGAAGAGAGGAATGATTCTTCCTTTTGAACCACAATATATCACCTTTAATGAAGTAACATATGCAGTTGATATGCCACAGGAAATGAAGAAAAAAGGAGTTATTGGAGATAGGTTGAACCTTTTGAAGGGTGTTAGTGGTGCTTTCAGGTCATGTGTTCTAACAGCACTAATGGGTGTCACTGGTGCTGGCAAAACAACTTTGATGGATGTGCTTTCTGGTAGAAAAACTGGTGGATATATTGGTGGGAACATCACAATTTCTGGCTATCCAAAGACTAAGGAAAGCTTTGCAAGAATTTGTGGATATTGTGAACAAAATGATATTCACTCTCCTTATGTTACCGTATATGAATCGTTGCTCTTTTCAGCATGGCTCCGATTGTCAGTAGGAATCAATGCTGAAACTAGGAAGATGTTCGTCGAGGAAGTTATGGAGCTCGTGGATCTGACCCCACTAAGGGATACGATTGTTGGATTGCCTGGTGCTAATGGACTCTCAACGCAACAGCGCAAAAGATTGACTATTGCAGTTGAGTTAGTAGCTAATCCTTCTATTATATTCATGGACCAGCCAACTTCTGGACTTGATGCACGATCGGTCGCAATTGTTATGAGAGCAATTAGAAATATAGTGGACAATGGAAGAACAATTGTTTGTGCCATTCATCAACCCaatattgatatatttgaatcttttgatgagCTGTTCTTGATGAAGCAAGGAGGGCAAGTGATATACGCGGGGCCAATTGGACATCATTCTTCCAACTTAATAAGTTACTTTGAGGGGATTCAAGGTGTCACTAAGATTGAAGATGGTTGTAACCCAGCAACTTGGATGTTGGAAGTAACTTCTCCAGCAAAAGAAATGGAATCGGGGATTGATTTTGCTGAGGTGTACAAGAATTCAGAATTATACAGGAGAAACAAAGATCTTATTTCAGAATTGAGCATTCCAGCTCCTGATTCTGAGGATCTTAATTTTCCTTCAAAGTACTCAAGGTCCCTTTTCACTCAATGCAAGGCTTGTTTATGGAAACAACATTGGTCTTACTGGCGTAATTCACAACACAATGGATTAAGGTTTCTCTTCACAATTGTTGCCTCCACCTTTCTAGGATGCACGCTTTTTGGCATCGGCTCCAAAGTGGAAAAGCAACAAGATCTCTTTAACTCCATAGGCTCAATGTCGATCACTATTCTACTAATCGGTATCAAGAATGCAAATTCGGTGCAAGCAGTGGTAAGTACAGAGAGAGTGGTGTTCTATAGGGAAAATTCTGCAAGAATGTATTCTTCTCTAGCATATGCTGTTGCTCAGGCAAGTTTTCTTCGGTCATTATTGAAATTCTCGTATAAATACTTCAGTGTCTATGCTTTTTTTATATCCAATCTTCATATTTGTATGCAGGCTCTAATTGAAATCCCTTATGTTTTTTTACAAGCTTTGATCTATGGAACTATTGTTTATGCAATGATTGGTTTCGAGTGGAGCGTAGCTAATTTTTATTGgtacatattttttgttttcttcaccGCACTATACTTTACGTACTATGGTATGATGTTAGTAGCCATGACCCGAAACCAAACCATTGCCTCTTTCCTCACTCGTCCGTCTTATGTATTATGGAGTCTTTTCTCAGGATCTGTAATTCCACCACCAAAAATTCCAATATGGTGGAGATGGTTTTATTGGGCAAATCCAATAGCATGGAGTTTTAATGGATTGGCGACTTCACAATTTGGAGGTATAAAAGATCATATTGAATCTAAGGGAAGAAGTGTTTCAGTAGAAGACTTTTTGGAAAATTACTACGGTTTCCGACATGATTTTTTGGGAGTAGTTGCAGCTGTACTTGTTGGAATCACACTTACTTTTGTATTGACCACAAGATACAGGATGAATCGTTTGAAAAGATCTTCTTCCCCTGAACGGAAACGACAAAGACTGTCACCTGAGTCCTCCTTGACAAATGATGAGCGTTTACTCTATAACCTCATACGTAGCAAGACAGACATAGGGATCTCGGCAGCAGACATGAAAAGAGACACAACCCTTCCTCCTTCTGTCAGTTCTGCGATCAATAAACTCCTGAAGACACTTGTGGCCAAGGAAGTTATAAAGGAAGTTGCTACCATTCAAAACAAAGGTAGAAAGAATTACATGGCAACAGAATTTATGCCTTCCACTGAAATCACCGGCGGGCATTTTTATAGTGATGGAGGTCTTGATACGGGACTTATAGACGCTCTAAAGAAAGTGTGTGTGCAATGCATTTCTCTGCAGAAAGTTTCCACATGTGATGGATGTTTGGAGTGGTGTAGAAAGAGCGGAGTCTTTACTACTGAAATCactgaaaaacaaataaaagagatTTTGGAAACTTTGATTTTGGATGATGAGATCGTGCAGATGACAAGTACTGGATATGGGGATTTTGCATCTGTTCCCGTTGGCAGAACTTGTTACATAGCCAAACGTAAGGGCGGAGTTAAAGGGGAAAAGAAATCTGTCAACAACACCCCCTTTCCATGTTTTTCTTGTCAACGAATGAGCGTTTGTTCACCCGAGGGCGCCATCTCTCCAGAAACATGTGTCTATTTTCAGAAATGGTTGGATTTCTGA 4941 0.3847 MESDVKSLKWASIQRLPTVARLRRGLLTTPQGDTNEIDVHNIGLQERTYLLQRLVKNNINTDDDDGMDNDDQSSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQSQVQVGKRALPTITNYMLDILEAPLKYILRRRKPHLNILEDVSGIIKHSRMTLLLGPPSSGKTTLLLALAGKLDPNLKFTGKVSYNGHEMNEFVPQRTAAYASQNDVHLGELTVRETLAFSAKVQGVGPRYDILAEVCRREKEENIIPDPDIDVYMKAVATEDQRANIVTEYILKILGLDICGDTMVGNATLKDISKGQRKCVTIGEMLVGPIKALFMDEISIGLDDSTTFQIVKSLKQFVHLLKRTAVISLQQPSLETFNLFDDIILLSDGHIVYQGPCEQVLGFFASMGFICPERKTVVDFLQEVTSRKDQEQYWIQKEKPYSFVTAKEFADAFELYHIGRSLFNELATQFDKSKSHPSALTTKKYGIGKWELFKACLSREYLLMKRNSLYYIFKLCQIALVAIITMTVFLPTRMHHDSVSDGGIYAGALLYGSTVLMLNGFAELSMMVVKLPVFYKQRDLLFFPSWAYSVPSWILKIPISFVEVGIWVSFTYSIIGDPNAVGWTFLLLVLVNQMATLFCQLVAAISRDMAMAGTLGTFSLGMLLVAVSKDNIRKWWLWEFWISPAMYGQNALLNNEFHGKTWRHVPPNSTEPLGVQILKARGFFTQSYWYWIGFVVLIGYTLLFVFGHILALTFLNPLKEHQVVKFARSLSRKQKFVRDSEQNQKRGMILPFEPQYITFNEVTYAVDMPQEMKKKGVIGDRLNLLKGVSGAFRSCVLTALMGVTGAGKTTLMDVLSGRKTGGYIGGNITISGYPKTKESFARICGYCEQNDIHSPYVTVYESLLFSAWLRLSVGINAETRKMFVEEVMELVDLTPLRDTIVGLPGANGLSTQQRKRLTIAVELVANPSIIFMDQPTSGLDARSVAIVMRAIRNIVDNGRTIVCAIHQPNIDIFESFDELFLMKQGGQVIYAGPIGHHSSNLISYFEGIQGVTKIEDGCNPATWMLEVTSPAKEMESGIDFAEVYKNSELYRRNKDLISELSIPAPDSEDLNFPSKYSRSLFTQCKACLWKQHWSYWRNSQHNGLRFLFTIVASTFLGCTLFGIGSKVEKQQDLFNSIGSMSITILLIGIKNANSVQAVVSTERVVFYRENSARMYSSLAYAVAQASFLRSLLKFSYKYFSVYAFFISNLHICMQALIEIPYVFLQALIYGTIVYAMIGFEWSVANFYWYIFFVFFTALYFTYYGMMLVAMTRNQTIASFLTRPSYVLWSLFSGSVIPPPKIPIWWRWFYWANPIAWSFNGLATSQFGGIKDHIESKGRSVSVEDFLENYYGFRHDFLGVVAAVLVGITLTFVLTTRYRMNRLKRSSSPERKRQRLSPESSLTNDERLLYNLIRSKTDIGISAADMKRDTTLPPSVSSAINKLLKTLVAKEVIKEVATIQNKGRKNYMATEFMPSTEITGGHFYSDGGLDTGLIDALKKVCVQCISLQKVSTCDGCLEWCRKSGVFTTEITEKQIKEILETLILDDEIVQMTSTGYGDFASVPVGRTCYIAKRKGGVKGEKKSVNNTPFPCFSCQRMSVCSPEGAISPETCVYFQKWLDF 1646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03753 1646 Pfam Plant PDR ABC transporter associated 689 751 IPR013581 -
Tsu07g03753 1646 Gene3D - 1429 1496 IPR036388 -
Tsu07g03753 1646 Pfam ABC-2 type transporter 1238 1353 IPR013525 GO:0016020|GO:0140359
Tsu07g03753 1646 Pfam ABC-2 type transporter 1109 1212 IPR013525 GO:0016020|GO:0140359
Tsu07g03753 1646 Pfam ABC-2 type transporter 479 684 IPR013525 GO:0016020|GO:0140359
Tsu07g03753 1646 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1239 1401 - -
Tsu07g03753 1646 Pfam ABC transporter 143 324 IPR003439 GO:0005524
Tsu07g03753 1646 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1239 1401 - -
Tsu07g03753 1646 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1213 - -
Tsu07g03753 1646 SUPERFAMILY "Winged helix" DNA-binding domain 1423 1497 IPR036390 -
Tsu07g03753 1646 Pfam ABC transporter 812 964 IPR003439 GO:0005524
Tsu07g03753 1646 Pfam ABC-2 type transporter 358 437 IPR043926 GO:0140359
Tsu07g03753 1646 Pfam ABC-transporter N-terminal 58 119 IPR029481 -
Tsu07g03753 1646 Gene3D - 797 1031 IPR027417 -
Tsu07g03753 1646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 127 400 IPR003439 GO:0005524
Tsu07g03753 1646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 400 IPR027417 -
Tsu07g03753 1646 Pfam RNA polymerase Rpc34 subunit 1425 1534 IPR007832 GO:0005666|GO:0006383
Tsu07g03753 1646 Pfam RNA polymerase Rpc34 subunit 1535 1645 IPR007832 GO:0005666|GO:0006383
Tsu07g03753 1646 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 2 1213 - -
Tsu07g03753 1646 CDD ABCG_PDR_domain2 781 1019 IPR034003 -
Tsu07g03753 1646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 1022 IPR027417 -
Tsu07g03753 1646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 784 1037 IPR003439 GO:0005524
Tsu07g03753 1646 SMART AAA_5 152 377 IPR003593 -
Tsu07g03753 1646 SMART AAA_5 821 1013 IPR003593 -
Tsu07g03753 1646 ProSitePatterns ABC transporters family signature. 299 313 IPR017871 GO:0005524
Tsu07g03753 1646 Gene3D - 129 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03753 Tsu-Chr7 43761675 43772125 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03753 K08711 - mtr:MTR_7g098890 2179.83