Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03751 ATGGAGAGTGGTATTGATGTTGAGGGAAGATTCAGAGGAAGCAGTAAGAGAAGTTTAAGGTTTGACGGCGGTGAGTCGGATAATGTCTTCCCTAACTCTGTTAATAGGGAGgacaatgatgatgaagaggCTTTGAAATGGGCTGCAATTCAGAGGCTTCCAACTGTTACACGTTTGAGGCGAGGTTTGTTGATTACCTCTGAAGGAGAGGTTAGCGAAATTGATGTACACAAACTTGGGTTGCAAGAAAGGAAATATTTGCTAGAAAGATTAGTGAGAATTGCTGATATTGacaatgataaattattattgaaattcaaGGAGCGCGTTAATAGAGTTGGAATTAAAATGCCAACAATCGAAGTTCGATTTGAGAACATGAAGATCGAAGCAGAAGTTCACGTAGGAAAGAGAGCTTCGCCTACCCTAACTAATTACGCGCTTGATATGGTAGAGGCTCCATTTAACTATatactaagaagaagaagacaacaAGTGAACATTCTCAAGAATGTTAGTGGAATAATAAAGCCTGGCAgGATGACATTGCTGTTAGGCCCTCCAAATTCTGGAAAAACAACACTCCTTTTGGCCTTGGCTGGAAAACTTAATCCCAAGCTAAAGTTCACTGGGAAGGTGACTTATAATGGTCATGAGATGAACGAGTTTGTTCCTCAGAGAACTGCTGCTTATGTCAGTCAAAACGATCTTCACATTGGAGAATTGACAGTTAGAGAAACTTTGGAATACTCAGCTAGATTCCAAGGTGTTGGACTTAGATATGATATGGTACAGGAGGTATctagaagagaaaaagagagaaacattATCCCTGATCCAGATATTGATGTCTTTATGAAGGCTATTGCAACTGGGGGCCAGAAATCAAATCTTGTAATAGATTATTATTTAAAGATTTTAGGACTAGAGACCTGTGCAGATACTGTTGTGGGAAATGCAATGCTAAGAGGTGTCTCTGGAGGACAAAGGAAACGGGTTACAACAGGGGAGATGCTAGTAGGAACAGCTAAGGCTCAATTCATGGATGAAATATCTACTGGTTTAGATAGCTCAACAACTTTTCAAGTTGTGCAATCAGTGAAGCAGTCTGTCCACCATCTCAATGGAACTGCTGTTATCTCACTCTTGCAGCCACCGCCAGAGACTTACGATCTTTTTGACGACATTATTCTACTCTCTGAGGGGCACATTGTGTACCAGGGTCCTTGTGAACACGTGCTTGAATTTTTTGCTTCATTAGGTTTCATGTGTCCTAAAAGAAAATCTGTGGCAGACTTTTTACAAGAAGTGACATCAAAGAAAGACCAGGAGCAATATTGGGCAGAAAGAGGGAAGCCTTATAGATTTGTGACACCTAAAGAGTTTGCGGAGGCATTTGAGTCATTTCATGTTGGGAGAAACCTTGGTAATGAACTTGCTACTCAATTTGACAAAGCTAAAAGCCACCCAGCTGCTTTGGCGACCAACAAGTTTGGGACTGGAAAGTGGGAATTGTTCAAAGCTTGCTTATCAAGAGAACTTTTACTCATGAAGCgcaattcatttatatataaattcaaaCTTTTCCAACTTGCTGTGATGGCTATCCTTACCATGACCCTTTTTCTCCGAACTGAAATGCACCACGATTCAGTGATTGATGGGAACATTTATGCCGGTGCATTGTTCTTTGGAAATATGGTGCTTATGTTTAATGGGTTTGCTGAACTTTCGATGACTGTTGAGAGGCTTCCTGTGTTTTACAAGCATAGGGACATGCTCTTCTACCCTTCTTGGGCATATGGTATTCCTTCATGGATCCTTAAAATTCCCATAACAATTGTTGAAGCAATTGTTTGGACAGTCATCACCTATTATGCTGTCGGTTACGATCCTGAAGTTGGAAGATTATTTAGGCAATTCATTCTTCTCATAATTATCAACCAAATGGGTACTGGACTATTCCGATTTCTTGGAGCAGTTGGCAGAGAAATGACGGTGGCTATAACACTTGCGTCATTTATATTGTGCTTCATTGTTGCCATAGGTGGTCTGGCCCTCTCCAGAGATGATATAAAAAAAGGGTGGATATGGGGATTCTGGATATCACCTATAATGTATGCACAAAATGGCTTAATGAATAATGAGTTCCTAGGGAAGACATGGAGACATgtTCTTCCTAACTCGACAAACCCGCTAGGAGTTGAAGTTTTGAAATCCCGCGGGTTCTTTACAGAGTCATACTGGTATTGGATATGTTTCGGCGCATTGATTGGATATACATTATTGTACAACTTGGGTTACATTCTTGCTCTAACTTACTTAAATCCAATTGAGGTTGAGAAGCATCAAGTTGTGAAGTCAGAGCAATCTCAAAGCAGTGAGGAGAATGGTGGAAACAAAAGTGGAATGGTTCTTCCTTTTGAACCTCATTGTATAACCTTTGATGAAGTCTCATATTCTGTGGACATGCCTCTGGAAATGAGGAGTCAGGGTGTCCTTGAAGATAAGTTGGTTCTTTTGAATGGTGTCAGTGGATCTTTTAGGCCAGGTGTTCTCACTGCACTAATGGGTGTCACCGGTGCCGGAAAAACAACTTTGCTGGATGTACTTGCTGGTAGAAAAACTGGGGGATATATTACTGGAAACATCACAATTTCAGGGTATCCCAAAAAGCAAGACACCTTTGCAAGAATTTCGGGATACTGTGAACAAAATGATATACACTCTCCTCATATTACTGTCTATGAATCCTTGCTCTATTCAGCATGGCTCCGATTGCCTGCGGAAATCAATACAGAAACTAGGAAGGTGTTCGTGGATGAAGTCATGGAGCTAGTGGAGCTGACCCCACTAAGGGATGCATATGTTGGTCTCCCTGGTATTAACGGTCTCTCAACTGAGCAGCGTAAAAGATTGACTATTGCTGTTGAGTTGGTTGCTAATCCTTCTATCATATTCATGGATGAACCAACTTCTGGGCTAGATGCAAGAGCTGCAGCTATTGTTATGAGAGCAGTTAGGAACATAGTAGACACCGGAAGAACAATTGTGTGTACCATTCACCAGCCCAGCATTGATATCTTTGAATCTTTCGATGAGGGGATTCAAGGCGTCATTAAGATTAAAGATGGCTACAACCCAGCAACTTGGATGTTGGAAGTTACGAGTTCAGCTAAAGAAATGGAAATGGAGATTAATTTTGCTGAGGTGTATAGAAGTTCAGAATTGTACAGGAGAAACAAAGCTATTATTGAAGAATTGAGCACTCCATCTTCTGGTTCAAAAAGCCTTTATTTTCCTACGAAGTACTCGAGATCTTTTTTTACCCAATGTATGGCTTGTTTATGGAAACAACATTGGTCTTACTGGCGCAATCCGTTGTACAATTCAATAAGGTTTATCTTCACAATTGCCGTCGCCTTGTTGCTTGGGAGCCTGTACTGGAAAATTTCCTCCAAAATTAAAAACCAAAAAGATTTCTTTAATGCCACGGGCTTTCTGTATACTGCTACGTTGGTTATTGGTACCAAGAATTGTAATTCTGTGCAACCACTGGTAGCTATAGAGCGAGTAGTCTTTTATAGGGAAAGGGCTGCAGGAATGTATTCAGCATTGGCATATGCCGTTTCTCAGGCAAGCATTGAACTAGTCTTTATTTACATAGTTCCATCCATGACCCCAAACCTAGCTATGGCTGCTTTACTCACTAGTGTGTTCAGTTCATTGTTTAATGTCTTCTCTGGATTCATAATCCCACAACCAAGGATCCCTATATGGTGGAGATGGTTTTATTGGATAAATCCAGCAGCTTGGACTCTAAATGGGCTGGTGACTTCACAATTTGGAGATATAAAGGATACTTTGGATTATAATGGAAGAATAGTTCCAATTCAAGACTTTTTGTGGAAGTATTTTGGTTTCAAGCATGAATTATTAGGAATTGTTGCAGTTATGATTGTTGGATTTACAATAAGTTTTGTACTGGCAGCATTGTCTGTGAACATCGGCTAA 4014 0.3954 MESGIDVEGRFRGSSKRSLRFDGGESDNVFPNSVNREDNDDEEALKWAAIQRLPTVTRLRRGLLITSEGEVSEIDVHKLGLQERKYLLERLVRIADIDNDKLLLKFKERVNRVGIKMPTIEVRFENMKIEAEVHVGKRASPTLTNYALDMVEAPFNYILRRRRQQVNILKNVSGIIKPGRMTLLLGPPNSGKTTLLLALAGKLNPKLKFTGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGELTVRETLEYSARFQGVGLRYDMVQEVSRREKERNIIPDPDIDVFMKAIATGGQKSNLVIDYYLKILGLETCADTVVGNAMLRGVSGGQRKRVTTGEMLVGTAKAQFMDEISTGLDSSTTFQVVQSVKQSVHHLNGTAVISLLQPPPETYDLFDDIILLSEGHIVYQGPCEHVLEFFASLGFMCPKRKSVADFLQEVTSKKDQEQYWAERGKPYRFVTPKEFAEAFESFHVGRNLGNELATQFDKAKSHPAALATNKFGTGKWELFKACLSRELLLMKRNSFIYKFKLFQLAVMAILTMTLFLRTEMHHDSVIDGNIYAGALFFGNMVLMFNGFAELSMTVERLPVFYKHRDMLFYPSWAYGIPSWILKIPITIVEAIVWTVITYYAVGYDPEVGRLFRQFILLIIINQMGTGLFRFLGAVGREMTVAITLASFILCFIVAIGGLALSRDDIKKGWIWGFWISPIMYAQNGLMNNEFLGKTWRHVLPNSTNPLGVEVLKSRGFFTESYWYWICFGALIGYTLLYNLGYILALTYLNPIEVEKHQVVKSEQSQSSEENGGNKSGMVLPFEPHCITFDEVSYSVDMPLEMRSQGVLEDKLVLLNGVSGSFRPGVLTALMGVTGAGKTTLLDVLAGRKTGGYITGNITISGYPKKQDTFARISGYCEQNDIHSPHITVYESLLYSAWLRLPAEINTETRKVFVDEVMELVELTPLRDAYVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNIVDTGRTIVCTIHQPSIDIFESFDEGIQGVIKIKDGYNPATWMLEVTSSAKEMEMEINFAEVYRSSELYRRNKAIIEELSTPSSGSKSLYFPTKYSRSFFTQCMACLWKQHWSYWRNPLYNSIRFIFTIAVALLLGSLYWKISSKIKNQKDFFNATGFLYTATLVIGTKNCNSVQPLVAIERVVFYRERAAGMYSALAYAVSQASIELVFIYIVPSMTPNLAMAALLTSVFSSLFNVFSGFIIPQPRIPIWWRWFYWINPAAWTLNGLVTSQFGDIKDTLDYNGRIVPIQDFLWKYFGFKHELLGIVAVMIVGFTISFVLAALSVNIG 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03751 1337 Pfam Plant PDR ABC transporter associated 722 781 IPR013581 -
Tsu07g03751 1337 Pfam ABC transporter 841 993 IPR003439 GO:0005524
Tsu07g03751 1337 MobiDBLite consensus disorder prediction 1 35 - -
Tsu07g03751 1337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 153 426 IPR003439 GO:0005524
Tsu07g03751 1337 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1225 1334 - -
Tsu07g03751 1337 CDD ABCG_PDR_domain1 150 408 IPR034001 -
Tsu07g03751 1337 Pfam ABC-2 type transporter 1225 1282 IPR013525 GO:0016020|GO:0140359
Tsu07g03751 1337 Pfam ABC-2 type transporter 505 717 IPR013525 GO:0016020|GO:0140359
Tsu07g03751 1337 Pfam ABC-2 type transporter 1110 1223 IPR013525 GO:0016020|GO:0140359
Tsu07g03751 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 426 IPR027417 -
Tsu07g03751 1337 Pfam ABC-transporter N-terminal 97 145 IPR029481 -
Tsu07g03751 1337 MobiDBLite consensus disorder prediction 1 23 - -
Tsu07g03751 1337 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Tsu07g03751 1337 SMART AAA_5 850 1041 IPR003593 -
Tsu07g03751 1337 SMART AAA_5 178 403 IPR003593 -
Tsu07g03751 1337 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1225 1334 - -
Tsu07g03751 1337 PANTHER ATP-BINDING CASSETTE TRANSPORTER 22 1222 - -
Tsu07g03751 1337 Gene3D - 155 458 IPR027417 -
Tsu07g03751 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 826 1025 IPR027417 -
Tsu07g03751 1337 Pfam ABC-2 type transporter 384 460 IPR043926 GO:0140359
Tsu07g03751 1337 CDD ABCG_PDR_domain2 810 1034 IPR034003 -
Tsu07g03751 1337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 813 1069 IPR003439 GO:0005524
Tsu07g03751 1337 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 22 1222 - -
Tsu07g03751 1337 Gene3D - 814 1040 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03751 Tsu-Chr7 43749940 43757885 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03751 K08711 - gmx:100813417 1864.35