Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03750 ATGGAGAGTGGAATTGATGTTGAGGGAAGATTCAGAGGAAGCAGTAAGAGAAGTTCTAGGTTTGACAGTTCATCATCATTAAGGATCAACCGTGAGGCGGATTATGTCTTTCCTAACTCTGTTAACAGGGAGgacaatgatgatgaagaggCTTTGAAATGGGCTGCCATTCAGAGGCTTCCAACTGTTACACGTTTGAGGAAAGGTTTGTTGATTACCTCTGAAGGAGAGGTTAGTGAAATTGATGTACACAAACTTGGGTTGCAAGAAAGGAAATATCTGCTAGAAAGATTAGTTAGAATTGCAGATATTGACAATGAgaaattattattgaaattcaGGGATCGCGTTAACAGAGTTGGAATTAAGATGCCTACAATTGAAGTTCGATTTGAGCACATGAGGATCGATGCAAAAGTTCACGTAGGAAAGAGAGCTTCGCCTACCCTCACTAATTATGTGCTTGATATGGTAGAGGTGAGTAATAATTACATTGAACACCAACAGTTAACAGCTTGCGAATACCATGTGTTTATTGATGGGGAAACTGATATACTAATTCCCTTATCTTTTCTTTCTTGGAATTTCAAGGCTCCATTTAACTATatactaagaagaagaagaagaaaacaagtGAACATTCTCAAGAATGTTAGTGGAATAATCAAGCCTGGCAGGATGACATTGCTGTTAGGCCCTCCAAGTTCTGGAAAAACGACACTTCTTTTGGCCCTGGCAGGAAAACTTGATCCCAAGCTAACGTTCTCTGGGAAGGTGACTTATAACGGTCATGAGATGAATGAATTTGTACCTCAAAGAACTGCTGCTTATGTCAGTCAAAATGATCTTCACATTGGAGAATTGACAGTTAGAGAAACATTGGAGTTCTCAGCTAGATTCCAAGGTGTTGGACTTAGATATGATATGCTAGAAGAGGTATctagaagagaaaaagagagaaacattATCCCTGATCCAGATATTGATGTCTTTATGAAGGCTATTGCAACTGGGTGCCAGAAATCGAATCTTGTAATAGATTATTATTTAAAGATTTTGGGACTAGAGACCTGTGCAGATACTGTGGTAGGAAATGCAATGTTAAGAGGTGTCTCTGGAGGACAAAGGAAACGTGTTACAACAGGGGAGATGCTAGTAGGAACAGCTAAGGCTTTATTCATGGATGAAATATCTACTGGTTTAGATAGCTCAACAACTTTTCAAGTTGTGCAATCAGTGAAGCAGTCTGTCCACCATCTCAATGGAACTGCTGTTATCTCACTCTTGCAGCCACCACCAGAGACTTACGATCTTTTTGACGACATTATTCTACTCTCTGAGGGGAACATTGTGTACCAGGGTCCTTGTGAACACGTGCTTGAATTTTTTGCTTCATTAGGTTTCATGTGTCCTAAAAGAAAATCTGTGGCAGACTTTTTACAAGAAGTGACATCAAAGAAAGACCAGGAGCAATATTGGGCAGAAAGAGGGAAGCCTTATAGATTTGTGACACCTAAAGAGTTTGCGGAGGCATTTGAGTCATTTCATGTTGGGAGAAACCTTGGTAATGAACTTGCTACTCAATTTGACAAAGCTAAAAGCCACCCAGCTGCTTTGGCGACCAACAAGTATGGGACTGGAAAGTGGGAATTGTTCAAAGCTTGCTTATCAAGAGAACTTTTACTCATGAAGCgcaattcatttatatataaattcaaaCTTTTCCAACTTGCGGTGATGGCTATCCTTACCATGACCGTTTTTCTCCGAACTGAAATGCACCATGATACAGTGATTGATGGAAACATTTATGCCGGTGCATTGTTCTTTGGAAATATGGTGCTTATGTTTAATGGATTTGCTGAACTTTCGATGACTGTTGTGAGGCTTCCTGTGTTTTACAAGCATAGGGACATGCTCTTCTACCCTTCTTGGGCATATGGTATTCCTTCATGGATCCTTAAAATTCCCATAACAATTGTTGAAGCAATTGTATGGACAGTCATCACCTATTATGCTGTCGGTTACGATCCTGAAGTTGGAagATTATTTAGGCAATTCATTCTTCTCATAATTATCAACCAAATGGGTACTGGACTATTCCGATTTCTTGGAGCAGTTGGTAGAGAAATGACGGTGGCTATAACACTTGCGTCATTTATATTGTGCTTCATTGTTGCCATAGGTGGTCTGGCCCTCTCCAGAGATGATATAAAAAAAGGGTGGATATGGGGATTCTGGATATCACCTATAATGTATGCACAAAATGGCTTAATGAATAATGAGTTCCTAGGGAAGACATGGAGACATgtTCTTCCTAACTCAACAAACCCGCTAGGAGTTGAAGTTTTGAAATCCCGCGGGTTCTTTACAGAGTCGTACTGGTATTGGATATGTTTTGGCGCATTGATTGGATATACATTATTGTACAACTTGGGTTACATTCTTGCTCTAACTTACTTAAATCCAATTGAGAAGCACCAAGTTGTGAAGTCAGAGCAATCTCAATGCAGTGAGGAGAATGGTGGAAGCAAAAGTGGAATGGTTCTTCCTTTTGAACCACATTGTATAACCTTTGAAAAAGTCTCATATTCTGTGGACATGCCTCAGGAAATGAGGAGTCAGGGTGTCCTTGAAGATAAGTTGGTTCTTTTGAATGGTGTCAGTGGAGCTTTTAGACCAGGTGATCTCACTGCACTAATGGGTGTCACCGGTGCCGGAAAAACAACTTTGATGGATGTACTTGCTGGTAGAAAAAGTGGGGGATATATTACTGGAAACATCACAATTTCAGGGTATCCCAAAAAGCAAGAAACCTTTGCAAGAATTTCGGGATACTGTGAACAAAATGATATACACTCTCCTCATATTACTGTCTATGAATCCTTGCTCTATTCAGCATGGCTCCGATTGCCTGTGGAAATCAATACAGAAACTAGGAAGGTGTTCGTGGATGAAGTCATGAAGCTAGTGGAGCTAACCCCACTAAGGGATGCATATGTTGGTCTCCCTGGTATTAACGGTCTCTCAACTGAGCAGCGTAAAAGATTGACTATTGCTGTTGAGTTGGTTGCTAATCCTTCTATCATATTCATGGATGAACCAACTTCTGGGCTAGATGCAAGAGCTGCAGCTATTGTTATGAGAGCAGTTAGGAACATAGTAGACACCGGAAGAACAATTGTGTGTACCATTCACCAGCCCAGCATTGATATCTTTGAATCTTTCGACGAGgGAATTCAAGGTGTCAATAAGATTAAAGATGGCTACAACCCAGCAACTTGGATGTTGGAAGTTACGAGTTCAGCTAAAGAAATGGAAATGGAGATTAATTTTGCTGTGTATAGAAGTTCAGAATTGTACAGGAGAAACAAAGCTATTATTGAAGAATTGAGCACTCCATCTCGTGGTTCAAAAAGCCTTTATTTTCCTACGAAGTACTCGAGATCTTTTTTTACCCAATGTTTGGCTTGTTTATGGAAACAACATTGGTCTTACTGGCGCAATCCGCTGTACAATTCAGTAAGGTTTATCTTCACAATCGCCGTCGCCTTGTTGCTTGGGAGCCTTGAAAACCAAAAAGATTTCTTTAATGCCATGGGCTTTCTGTATACTGCTACGTTGGTTATTGGTTCCAAGAATTGTAATTCTGTGCAACCACTGGTAGCTATAGAGCGAGTAGTCTTTTATAGGGAAAGGGCTGCAGGAATGTATTCAGCATTGGCATATGCCGTTTCTCAGGCAAGCATTGAACTAGTCTTTATTTACATAGTTCCATCCATGACCCCAAACCTAGCTATGGCTGCTTTACTCACTAGTGTGTTCAGTTCATTGTTTAATGTCTTCTCTGGATTTTTAATCCCACAACCAAGGATCCCTATATGGTGGAGATGGTTTTATTGGATAAATCCAGCAGCTTGGACTCTAAATGGGCTGGTGACTTCACAATATGGAGATATAAAGGATACTTTGGATTTTAATGGAAGAATAGTTCCAATACAAGACTTTTTGTGGAAGTATTTTGGTTTCAAGCATGAATTTTTAGGAATTGTTGCAGTTATAATTGTTGGATTTACAATAAGTTTTGTACTGGTTTTTGCCATATGCatcaagaaattaaattttcaacGACGCTGA 4137 0.3884 MESGIDVEGRFRGSSKRSSRFDSSSSLRINREADYVFPNSVNREDNDDEEALKWAAIQRLPTVTRLRKGLLITSEGEVSEIDVHKLGLQERKYLLERLVRIADIDNEKLLLKFRDRVNRVGIKMPTIEVRFEHMRIDAKVHVGKRASPTLTNYVLDMVEVSNNYIEHQQLTACEYHVFIDGETDILIPLSFLSWNFKAPFNYILRRRRRKQVNILKNVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLTFSGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGELTVRETLEFSARFQGVGLRYDMLEEVSRREKERNIIPDPDIDVFMKAIATGCQKSNLVIDYYLKILGLETCADTVVGNAMLRGVSGGQRKRVTTGEMLVGTAKALFMDEISTGLDSSTTFQVVQSVKQSVHHLNGTAVISLLQPPPETYDLFDDIILLSEGNIVYQGPCEHVLEFFASLGFMCPKRKSVADFLQEVTSKKDQEQYWAERGKPYRFVTPKEFAEAFESFHVGRNLGNELATQFDKAKSHPAALATNKYGTGKWELFKACLSRELLLMKRNSFIYKFKLFQLAVMAILTMTVFLRTEMHHDTVIDGNIYAGALFFGNMVLMFNGFAELSMTVVRLPVFYKHRDMLFYPSWAYGIPSWILKIPITIVEAIVWTVITYYAVGYDPEVGRLFRQFILLIIINQMGTGLFRFLGAVGREMTVAITLASFILCFIVAIGGLALSRDDIKKGWIWGFWISPIMYAQNGLMNNEFLGKTWRHVLPNSTNPLGVEVLKSRGFFTESYWYWICFGALIGYTLLYNLGYILALTYLNPIEKHQVVKSEQSQCSEENGGSKSGMVLPFEPHCITFEKVSYSVDMPQEMRSQGVLEDKLVLLNGVSGAFRPGDLTALMGVTGAGKTTLMDVLAGRKSGGYITGNITISGYPKKQETFARISGYCEQNDIHSPHITVYESLLYSAWLRLPVEINTETRKVFVDEVMKLVELTPLRDAYVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNIVDTGRTIVCTIHQPSIDIFESFDEGIQGVNKIKDGYNPATWMLEVTSSAKEMEMEINFAVYRSSELYRRNKAIIEELSTPSRGSKSLYFPTKYSRSFFTQCLACLWKQHWSYWRNPLYNSVRFIFTIAVALLLGSLENQKDFFNAMGFLYTATLVIGSKNCNSVQPLVAIERVVFYRERAAGMYSALAYAVSQASIELVFIYIVPSMTPNLAMAALLTSVFSSLFNVFSGFLIPQPRIPIWWRWFYWINPAAWTLNGLVTSQYGDIKDTLDFNGRIVPIQDFLWKYFGFKHEFLGIVAVIIVGFTISFVLVFAICIKKLNFQRR 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03750 1378 Pfam ABC-2 type transporter 430 483 IPR043926 GO:0140359
Tsu07g03750 1378 CDD ABCG_PDR_domain2 854 1078 IPR034003 -
Tsu07g03750 1378 Pfam ABC transporter 215 397 IPR003439 GO:0005524
Tsu07g03750 1378 MobiDBLite consensus disorder prediction 1 23 - -
Tsu07g03750 1378 Pfam ABC transporter 885 1037 IPR003439 GO:0005524
Tsu07g03750 1378 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 20 166 - -
Tsu07g03750 1378 Pfam ABC-2 type transporter 1153 1258 IPR013525 GO:0016020|GO:0140359
Tsu07g03750 1378 Pfam ABC-2 type transporter 551 763 IPR013525 GO:0016020|GO:0140359
Tsu07g03750 1378 Pfam ABC-2 type transporter 1260 1316 IPR013525 GO:0016020|GO:0140359
Tsu07g03750 1378 SMART AAA_5 894 1087 IPR003593 -
Tsu07g03750 1378 SMART AAA_5 224 449 IPR003593 -
Tsu07g03750 1378 CDD ABCG_PDR_domain1 190 454 IPR034001 -
Tsu07g03750 1378 Pfam ABC-transporter N-terminal 102 152 IPR029481 -
Tsu07g03750 1378 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 198 472 IPR003439 GO:0005524
Tsu07g03750 1378 Gene3D - 200 504 IPR027417 -
Tsu07g03750 1378 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 857 1108 IPR003439 GO:0005524
Tsu07g03750 1378 PANTHER ATP-BINDING CASSETTE TRANSPORTER 198 1257 - -
Tsu07g03750 1378 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 198 1257 - -
Tsu07g03750 1378 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1260 1378 - -
Tsu07g03750 1378 Gene3D - 857 1080 IPR027417 -
Tsu07g03750 1378 MobiDBLite consensus disorder prediction 1 17 - -
Tsu07g03750 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 880 1069 IPR027417 -
Tsu07g03750 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 472 IPR027417 -
Tsu07g03750 1378 Pfam Plant PDR ABC transporter associated 768 830 IPR013581 -
Tsu07g03750 1378 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 166 - -
Tsu07g03750 1378 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1260 1378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03750 Tsu-Chr7 43726853 43734358 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03750 K08711 - gmx:100813417 1858.19