Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03745 ATGGCTAAGAAGCctctttctctcattttctcaactCCATTTTTTCTGAACATAAAAATggaagaaggagaaggaagTGGGTTGAAACCAATGGATGCTGAGCAACTGAGAGAACAAGCTCATAAGATGGTAGACTTCATTGCTGATTACTACAAAACTATCGAAACTTTCCCAGTTCTCAGCCAAGTTGAGCCAGGTTATCTTGGAAAGCTTCTACCAGATTCTGCTCCTACTTACCCTACACTATTGGAACATGTTTTGGATGATGTACAGCATAAGATATTACCGGGGGTAACACATTGGCAAAGCCCGAATTATTTTGCATATTTTCCATCCAATAGCAGCATTGCTGGTTTTTTAGGAGAGATGCTTAGTGCTGGTATCAACATTGTGGGTTTCAGCTGGATAACTTCTCCTGCTGCAACTGAACTCGAATCAATTGTCCTTGACTGGCTTGCCAAGGCACTCTTTCTGCCTCAGGATTTCCTTTCTAGTGGGAGAGGGGGTGGAGTTATACAGGGAACAGCAAGTGAAGCTGTGCTAGTTGTATTGTTGGCTGCCCGCGACAAGATCCTGAAGACGGTTGGAAGGAGTGCCCTTCCTAAGCTTGTGACATATGCATCGGACCAAGTCCACTCTTCTTTACAAAAAGCTTGTCAGATAGCAGGACTTGATCCAGAGCTTTGCAAGTTGCTTAAAACAGATTCTTCAACAAATTTTGCACTTTCCCCTGATGTACTTTCTGAAGCAATTTCAAAAGACATTGCCAGTGGTCTTATACCCTTTTTCTTATGCGCTAACGTTGGTACTACGTCATCAACAGCTGTTGATCCTCTACCTGCATTGGCGAAAGTCACTAAGACCAACAACATTTGGTTTCATGTGGATGCTGCTTATGCTGGAAGTGCTTGTATATGTCCAGAGTACCGCCACTTCATTGACGGAGTTGAAGAAGCTGATTCATTTAACATGAATGCACATAAATGGTTCCTTACTAACTTTGACTGTTCACTACTTTGGGTTAAGGACAGGAGTCCTCTGATTCAGTCGCTGTCTACAAATCCTGAATTTCTGAAAAATAAGGCCTCTGAAAGAAACACGGTCATAGATTATAAAGACTGGCAAATTCCTCTTGGGCGTCGCTTCAGATCATTAAAACTTTGGATGGTAATGCGGCTCTATGGATTGGAAGGCCTGCGAGCTCACATAAGAAACCACATCGCAATGGCAGCTAAGTTTGAGGAGCTTGTAGTTCAAGACAAAAGATTCAAGGTCGTTGCGCCTCGAACATTCTCATTAGTTTGTTTTCGGCTTTTACCTCCCCCAAACTCTGAAGATAATGGCAATAAACTGAACAGTGATCTACTCGACTCGGTAAACTCAACAGGAAGTGTTTTCATTACACACACGGTTCTATCGGGTGAGTACATTCTACGTCTTGCAGTAGGAGCACCATTGACTGAAGTGAGGCACATCAATGCGGCGTGGCAGATTTTGCAAGAAAAAGCCACTGCTCTATTAGAAAATTTATAG 1533 0.4168 MAKKPLSLIFSTPFFLNIKMEEGEGSGLKPMDAEQLREQAHKMVDFIADYYKTIETFPVLSQVEPGYLGKLLPDSAPTYPTLLEHVLDDVQHKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGINIVGFSWITSPAATELESIVLDWLAKALFLPQDFLSSGRGGGVIQGTASEAVLVVLLAARDKILKTVGRSALPKLVTYASDQVHSSLQKACQIAGLDPELCKLLKTDSSTNFALSPDVLSEAISKDIASGLIPFFLCANVGTTSSTAVDPLPALAKVTKTNNIWFHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRSPLIQSLSTNPEFLKNKASERNTVIDYKDWQIPLGRRFRSLKLWMVMRLYGLEGLRAHIRNHIAMAAKFEELVVQDKRFKVVAPRTFSLVCFRLLPPPNSEDNGNKLNSDLLDSVNSTGSVFITHTVLSGEYILRLAVGAPLTEVRHINAAWQILQEKATALLENL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03745 510 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 31 507 - -
Tsu07g03745 510 PANTHER BNAA07G00240D PROTEIN 31 507 - -
Tsu07g03745 510 Gene3D Aspartate Aminotransferase, domain 1 405 510 IPR015422 GO:0003824
Tsu07g03745 510 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 321 342 IPR021115 GO:0016831
Tsu07g03745 510 Gene3D - 112 404 IPR015421 GO:0003824
Tsu07g03745 510 Pfam Pyridoxal-dependent decarboxylase conserved domain 65 438 IPR002129 GO:0016830|GO:0019752|GO:0030170
Tsu07g03745 510 SUPERFAMILY PLP-dependent transferases 31 504 IPR015424 -
Tsu07g03745 510 Gene3D - 26 111 - -
Tsu07g03745 510 CDD DOPA_deC_like 106 501 - -
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 103 122 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 59 76 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 77 96 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 420 439 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 124 142 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 168 188 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 36 55 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 377 392 IPR010977 GO:0006520|GO:0016831
Tsu07g03745 510 PRINTS Aromatic-L-amino-acid decarboxylase signature 143 162 IPR010977 GO:0006520|GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03745 Tsu-Chr7 43630514 43636472 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03745 K01593 - gmx:100791074 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03745 07 43630514 43636472 Tsu07g03745 07 43630514 43636472 ECH