Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03732 ATGGCTTCATCAAAGGATAAAccctcttcttcttctgatgATGATCAACAACCTAGGAAAAGACTTATCATCAAACTTTCTTATCCAAAAGCTGATGATTCTCAAGGCAACAAGAAGAGAAGGATGGAAAAGCCAATAGTTTCTTGCTATTGGCTTGATGCAAACCTACCTCTACAGAAGAATGGTGTTCAACACACAAAAGAAGGGTTAGTCAAAGAAAACTCAAAGGATATTAATGGTGACTTTGGCAGCAAGAAAGTGGACAATGAAGTAGCTAATTCTAAACCCTTTTCTTCTTTCATCAAAGATCATTCTATAAGAGCTGGAAAATATGGCTTAAAGAAGAGTGATGGCAATGGTGGAACTGAGTTGATGGTTaaggaagagaagaaaaagaagccAATGGAACATTACAAAAGGATGCAATGTTGGGTTATTGTGAAGAGAATGATAGAAGGAAGTGATGGTTGGGCTTTGAAAACACCTCTTGATATCAAGTGTTTGAAACGTGGCTTGGAGAACAAGTCAAAAGTGAAGAAGGCAATTGGTTTGAAAGATATTGAGGGCAAATTGAAATCATATTCATCGCCCGATgaatttgctgatgatatgagGTTTGTATTCCATCATGGATTGTGTTACCCTCGAGGAGATGATGTTTATAGAATTGCAGGAAGACTTAGTGACACTTTTGAGCACAAGTGGAAGAACCTCACCCTCTGTGCCCTACTTCACAATTTTCCAATTCTCGATTTACCACCAAAAACTGTCATCGGAATCAACCACTGTGAACCGAAACACCACTCTCTTCTCTTCAACGAAACCGTTTATCACTTTCTCTCTCATAAGATTTTTTGTTCAAGTATGGGGGATAGTGAAACAATGGTTACGGAATCATCTGCTGCTGAGACGTATCCATCGGATGGTTACAACAACACCGCTTCGAATCCAGTTCCCGAGGCTGCTCCTGCTCCTGCCGCTCCTGCCGAGGTTGCAGGAGAAGCTGCTGTTCAGGATAATTCAAGCTCTGAGTTAGGTTATTCTGGTGATGGGAATGCGTATACTGCCGGGGATCCTAATTCTGTACTTCAACAAGCTCAGTTTAGTGCTACAAATGAGTCCAAGCAAGTTGCTGGAGCGCCTGATGCTAACTCGGGTGCGGTTGGAAATGAAGCTGCGGATTCTACTATGGTTTCTGGTGAACATTTGTCTGTAAATGGAGGTGTTGATACTGCTGGACTTGAAAATGGAAATGCAGTAGAGCATGTTGATGCGGCAGCTGATGAGAAACAGCTTACAGATGCTTACGCTGCTTTGTCTGCTGAAGAGGATAGACTGTGGAATATTGTAACAGCTAATTCTTCAGATTTTACTGCTTGGACTTCTTTGATTGAAGAGACTGAGAAGGTGGCAGAGAACAACATTTTGAAGATTCGTAGAGTCTATGATGCTTTCCTGGCAGAATTCCCTTTGTGTTATGGGTATTGGAAAAAATATGCTGACCATGAGGCGCGCCTTGGCACTGCTGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTACATTATTGCATATTTGCCATAAGCACCTATGGAGATCCAGACACAGTTCGTAGGCTTTTTGAACGTGGATTAGCTTATGTTGGAACAGATTATCTTTCCTTTCCTCTTTGGGATAAATACATTGAATATGAGTATTTGCAGCAAGACTGGGCCCGCCTTGCGATGATCTACACCAGAAtattagagaatccaaatcagCAGTTGGATCGGTATTTCAACAGCTTCAAGGAGTTGGCTAGTAACCGACCTTTGTCAGAATTACGGACAACTGATGAAGCTGCTGCAGTGGCAGGTGTTGTTTCAGAGGGTACTGACCAAGGTGTTGAAGGAGAGGTTCGTCCGGATGGTGCGGACAGTTCTCCTAAAGCTGTAAATGCTGGATTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTTGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCTCTTAATATTGGGGAACTTGAGAATTGGCATAACTATCTGGACTTCATAGAAAGAGAAGGTGACTTGAGCAAGATTGTCAAGTTGTATGAGAGATGCGTCATTGCCTGTGCCAATTATCCCGAGTACTGGATACGTTATGTTTTGTGTATGGAAGCTAGTGAAAGTGTGGATCTTGCAAATAATGTTCTTGCCCGGGCAAGCCAAGTCTTTGTCAAGAGACAACCTGAGATACATCTTTTTTGTGCTCGGTTCAAGGAGCAGGCTGAAGATATAGCGGGTGCTAGAGCTGCATATCAACTTGTGCACACTGAAATTTCTCCAGGTCTTCTTGAAGCAATAATCAGGCATGCTAATATGGAACATCGATTGGGGAAGTTGGAGGATGCCTTCTCTTTGTATGAACAAGCCATTGCCATTGAAAAAGGGAAAGAACATTCACAAACACTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGGGAATGCAGAAAAGGCTAGAGAGATTTTAGTTGGGGGGCTTGAGAATGCTTCCCTGTCAAAGCCACTTCTTGAGGCTTTATTGCATTTTGAGGCTATTCAGCCCCAACCAAAGCAAATTAACATTGACTTTCTAGAGTCATTGGTTGTAAAATTCATAACGCCTAACCCAGAGATCCCTGGTGTAGCAAATGCAACAGAGCGCGAGGAACTTTCTTCTGTTTTTCTAGAGTTTTTAAATCTCTTTGGAGATGTTCAATCTATCAAGAGGGGTGAGGATAGACATGCCAAACTGTTCTTGCCACACAGGAGCTTGTCGGAGTTGAAAAAACGTCATGCAGAGGATTTCCTAGCTTCAGATAAAACAAAAGTGGCGAGAGCTTATTCTGCTCAATCACCTGCTCAATCTGCAATTGGTGCATATCCAAATGCACCTAACCAATGGACTAACTATGGAGTACAGCCACAGACTTGGCCAGCGACTACACAAGCACAAGGACAACAATGGCCTGCTGGCTACACCCAGCAGCAGGCTTCTTATGGGGCTTATGCTGGATATGGAGGTAACTATGCTAACCCACAATTGCCCGCATCAGTTCCACCAAGCACTGCTTACGGAGCTTATCCTCCTGCATATCCTGCACAGCCGACCCTGCCTCAACAAAATTATGCACAACCTGTTGCAGCCCCGACACAGCAACCTGCAGCAGTTCCTCAGGCCTATTACGGGAGTTACTACTGA 3339 0.4199 MASSKDKPSSSSDDDQQPRKRLIIKLSYPKADDSQGNKKRRMEKPIVSCYWLDANLPLQKNGVQHTKEGLVKENSKDINGDFGSKKVDNEVANSKPFSSFIKDHSIRAGKYGLKKSDGNGGTELMVKEEKKKKPMEHYKRMQCWVIVKRMIEGSDGWALKTPLDIKCLKRGLENKSKVKKAIGLKDIEGKLKSYSSPDEFADDMRFVFHHGLCYPRGDDVYRIAGRLSDTFEHKWKNLTLCALLHNFPILDLPPKTVIGINHCEPKHHSLLFNETVYHFLSHKIFCSSMGDSETMVTESSAAETYPSDGYNNTASNPVPEAAPAPAAPAEVAGEAAVQDNSSSELGYSGDGNAYTAGDPNSVLQQAQFSATNESKQVAGAPDANSGAVGNEAADSTMVSGEHLSVNGGVDTAGLENGNAVEHVDAAADEKQLTDAYAALSAEEDRLWNIVTANSSDFTAWTSLIEETEKVAENNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGTADKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYLQQDWARLAMIYTRILENPNQQLDRYFNSFKELASNRPLSELRTTDEAAAVAGVVSEGTDQGVEGEVRPDGADSSPKAVNAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASESVDLANNVLARASQVFVKRQPEIHLFCARFKEQAEDIAGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKAREILVGGLENASLSKPLLEALLHFEAIQPQPKQINIDFLESLVVKFITPNPEIPGVANATEREELSSVFLEFLNLFGDVQSIKRGEDRHAKLFLPHRSLSELKKRHAEDFLASDKTKVARAYSAQSPAQSAIGAYPNAPNQWTNYGVQPQTWPATTQAQGQQWPAGYTQQQASYGAYAGYGGNYANPQLPASVPPSTAYGAYPPAYPAQPTLPQQNYAQPVAAPTQQPAAVPQAYYGSYY 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03732 1112 SUPERFAMILY TPR-like 450 612 IPR011990 GO:0005515
Tsu07g03732 1112 Gene3D - 122 240 IPR036427 GO:0005515
Tsu07g03732 1112 SUPERFAMILY Bromodomain 127 239 IPR036427 GO:0005515
Tsu07g03732 1112 MobiDBLite consensus disorder prediction 297 318 - -
Tsu07g03732 1112 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 289 1099 - -
Tsu07g03732 1112 SMART hat_new_1 542 577 IPR003107 GO:0006396
Tsu07g03732 1112 SMART hat_new_1 722 754 IPR003107 GO:0006396
Tsu07g03732 1112 SMART hat_new_1 867 899 IPR003107 GO:0006396
Tsu07g03732 1112 SMART hat_new_1 473 505 IPR003107 GO:0006396
Tsu07g03732 1112 SMART hat_new_1 507 539 IPR003107 GO:0006396
Tsu07g03732 1112 SMART hat_new_1 826 861 IPR003107 GO:0006396
Tsu07g03732 1112 SMART hat_new_1 579 612 IPR003107 GO:0006396
Tsu07g03732 1112 MobiDBLite consensus disorder prediction 1 41 - -
Tsu07g03732 1112 Gene3D Tetratricopeptide repeat domain 702 1001 IPR011990 GO:0005515
Tsu07g03732 1112 SUPERFAMILY TPR-like 666 971 IPR011990 GO:0005515
Tsu07g03732 1112 PANTHER PRE-MRNA-PROCESSING FACTOR 39 289 1099 - -
Tsu07g03732 1112 MobiDBLite consensus disorder prediction 336 379 - -
Tsu07g03732 1112 Gene3D Tetratricopeptide repeat domain 448 617 IPR011990 GO:0005515
Tsu07g03732 1112 MobiDBLite consensus disorder prediction 635 654 - -
Tsu07g03732 1112 MobiDBLite consensus disorder prediction 297 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03732 Tsu-Chr7 43529193 43540838 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03732 K13217 - gmx:100787373 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03732 07 43529193 43540838 Tsu07g03732 07 43529193 43540838 ECH