Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03730 ATGGGTATCCtcagaacaaaacaaacactcTCATTTCTCATTCTATTCAATCTTTCATCACTTGTTTTCACAACAACCGATATCACAAACGTTGTTTACAAAGGTTGTTCAGAACAAAAACTACCACAACAATCTTCACCAAATCTACAATCACTGTTATCTTCTCTTGTATCAGCATCAGCACAAAAAACTTTCGCCACCACAACCACCGGCGACGGTCAAAACACAGTCGCCGGTGTTTACCAATGTAGAGGTGACCTTTCAACTTCTGATTGTTATCTTTGTATCAGCAAGATTCCTAGCAAGTTAAGTAAGCTTTGTGGCGAAGTTGCGGCGGCGAGAATTCAGCTTAGTGGGTGTTATTTAAGGTATGAGGTTGTTGGGTTTAAGCAAGTTCCTATGACTCAATTGCTTTATAAGGTTTGTGGTTCAAAGAAGGTTAATGATGGTGTTGGGTTTGAGGCTAAAAGGGATTCTGGTTTTGGAATGGTGGAAAATGGTGTGAAGAATGGTGGGAATTTGTTCTATACTGGAAGTTATATGTCTTTGTATGTTTTGGGTCAATGTGAGGGTAGTTTGGGAAATGATGATTGTGGTGATTGTATTAAGACTGCTGAAGAACAAGCTAAATTGGAATGTGGTGATTCAGTTTCTGCTCAGATTTATTTGTTTAGTTGCTTTATCAGTTATAGTTTTTATCCTAATGGAGTTTCTAGcacatcttcttcctcttcagGATCAGGAGGAGGGAATCCACACACAGAGAGGACAGTGGCGCTTGCAGTTGGAGGAGTTGCAGCTGTTGGattcttctttgtttgtttgatgTTTCTTAAATCAGTGCTTAAGAAAAAAGGAACAAAGGATATTTTTGTAACCACCGACAACGGTGATGATTCTGCTTCTGCTGCAAAAGAAAAAGCTCCAATTGAAGCTGCAGAACATATTAAAGATAAAACACTGCAAACTGAAAAGGAAAGACAACTTTGGATCCATAATGATTATGTttgcaaaaactatatcattaatgGACTGGAAGATGACTTGTATGATTATTACAGAACATACGAGACTGCTCGTGATGATGTTGCGTTGTTTGTTTATGGAATATTCAAGAAATATATCGGGGTTCTTGAACAAGCAGTTAGTGGCAAGTCTGCTCTTCCCAGTGGAATTACCGCAGTCGATGATCTTGGATACTCTCTTACTATGTTGATGGACATCtgtgttgtggcaagtTCTGGAAATATGTCATTTTATGATCATTTTCCACAAAATCATGATGAACTGATGAAGAATAATGATGCTTCCATAGATGAAAAGCCCTTTGAAATTTCATTTCAGAGAATTAAGTCGGCCTCACCTATAAAGTCTCCTCAACTTTATGGATTTGGGTGTGCCACTTCTAGCAACAATGCTTCTAGAAAAGCTCTAACATGTAAAAAAAGAAGGATAACATGGACTAAGGAACTGCATGGACTAAGCTCCAATTCTAAGATTAGGACATACTAA 1512 0.3591 MGILRTKQTLSFLILFNLSSLVFTTTDITNVVYKGCSEQKLPQQSSPNLQSLLSSLVSASAQKTFATTTTGDGQNTVAGVYQCRGDLSTSDCYLCISKIPSKLSKLCGEVAAARIQLSGCYLRYEVVGFKQVPMTQLLYKVCGSKKVNDGVGFEAKRDSGFGMVENGVKNGGNLFYTGSYMSLYVLGQCEGSLGNDDCGDCIKTAEEQAKLECGDSVSAQIYLFSCFISYSFYPNGVSSTSSSSSGSGGGNPHTERTVALAVGGVAAVGFFFVCLMFLKSVLKKKGTKDIFVTTDNGDDSASAAKEKAPIEAAEHIKDKTLQTEKERQLWIHNDYVCKNYIINGLEDDLYDYYRTYETARDDVALFVYGIFKKYIGVLEQAVSGKSALPSGITAVDDLGYSLTMLMDICVVASSGNMSFYDHFPQNHDELMKNNDASIDEKPFEISFQRIKSASPIKSPQLYGFGCATSSNNASRKALTCKKRRITWTKELHGLSSNSKIRTY 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03730 503 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Tsu07g03730 503 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 9 286 - -
Tsu07g03730 503 Gene3D - 134 234 IPR038408 -
Tsu07g03730 503 Gene3D - 28 129 IPR038408 -
Tsu07g03730 503 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 286 - -
Tsu07g03730 503 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Tsu07g03730 503 Pfam Salt stress response/antifungal 46 125 IPR002902 -
Tsu07g03730 503 Pfam Salt stress response/antifungal 175 232 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03730 Tsu-Chr7 43515719 43526021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03730 42 288 Receptor kinase-like Gene Family AT1G70530 27.652 1.53e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03730 - - gmx:100810212 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03730 07 43515719 43526021 Tsu07g03730 07 43515719 43526021 ECH