Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03703 ATGTCCAGTGACAATAAGATGAAGGGTCTCCTAAAAGGCCTGAGAATCCTTTCTCAGATATTTGATGAAAAAGAACAAGAAATTGAGATTGGTAATCCCACAGATGTAAAGCATGTGGCACATATTGGAATGGATGGTCCTACTGAAAATAATCCCAGCTGGATGAATGAGTTTAAATCTAATTCGGGACATTCATCATCAGCACCTTTAAATATTAATGGAAACAATCATTCTAGAGAACTTGATGATTGGGCCTCATTTGATTCAATGGAAAGAGGTTCAAAGTCCATTAATGATAAAGAGGATACACATGAACCTAAATCATCTAAGCAACAATCACATTCAGGAAACATGAGAGAGTCACATGCAAAGGAAAAATCAGACAAACCAAGGCAGACAAAAAAGAATTCCAAACATTCAACATCAAATGATTCATTCAATGAATCCAAACACACAACGACAGGACAACCTATTTCAAAAGATACAGACTCCCTCCAACTCCAAGGGGATACTAATGATAATTTACCACCTAGGGTCAAACCAGACAATCCTAAAACGACTCATTCGAAGAAAACAAAAGATGGATCATCTAAATCTAGATCAAAAGCTCAATCTAAAGAGTCTAATTCCAATGAAGGTACACATTCTAGATCAGGTTCTAAATCTAAAGAGTCAAATTCTAAAGAAGGGACACATTCTAGACGTAGTTCCAAATCTAAGGACTCAAACTCGAACGATGGATCTCATTCAAGAACGAGTTCTAAATCTAAAGACTCGAACTCCAAAGAAGGACCTCGCTCTAAGTCGAGTTCCAAATCTAAGGACTTAAACTCGAACGAAGGAGATCTTTCTAGACCCAATTCTAAACCTAGGAGCAAGCATAGACTCAGTGAAGAAGGTGGACAACTTAAGAGAGGATCCAATGAAAATATTGGTGTTCAAGACTGTTGGAGGTGGTATCCTGATCCATACTCAGGGAAAGAAGAGGAAGATCCTTCCTTCGTCGTTGAAGACATGAACATCTTCACCAAGAAACCCACCGCCAaagAGGCTCTTCGCGAGAGTAAACGCGAAATGACTAACGCCACTAGAGGTATAGAGAGGGAAATTGGATCATTACAATTAGAAGAAAAGAAACTTGTTGCTGAGATTAAGAGAACTGCTAAGACAGGAAACGAGGGAGCAACTAAAATTCTAGCTCGTCAGTTGATAAGGCTGAGACAACAGATTGCTAATCTTCAGGGTAGTCGAGCTCAAATGAGAGGCATAGCAACTCATACGCAGGCTATGCATGCTCATTCTTCTGTTGCTGTTGGCATGAAAGGTGCTACTAAGGCTATGGCAGCTATGAATAAGCAAATGGAACCAGCAAAGCAAGCCAAAGTTATGCAGGAATTCCAGAAACAATCGGCACAGATGGATATGACTACTGAAATGATGTCAGATGTCATAGATGATGCCTTGGATGATGATGAAGCTGAAGAGGAGACTGAAGAGCTTACAAATCAAGTGCTTGATGAAATCGGTGTGGATATTGCCTCACAGTTATCAGCAGCTCCCAAAGGAAGAGTCGCAACAAAAAATACTGAAAATGTCGGCAGGTATTTTCttgaaaaccaaaaagaaaattaa 1632 0.3922 MSSDNKMKGLLKGLRILSQIFDEKEQEIEIGNPTDVKHVAHIGMDGPTENNPSWMNEFKSNSGHSSSAPLNINGNNHSRELDDWASFDSMERGSKSINDKEDTHEPKSSKQQSHSGNMRESHAKEKSDKPRQTKKNSKHSTSNDSFNESKHTTTGQPISKDTDSLQLQGDTNDNLPPRVKPDNPKTTHSKKTKDGSSKSRSKAQSKESNSNEGTHSRSGSKSKESNSKEGTHSRRSSKSKDSNSNDGSHSRTSSKSKDSNSKEGPRSKSSSKSKDLNSNEGDLSRPNSKPRSKHRLSEEGGQLKRGSNENIGVQDCWRWYPDPYSGKEEEDPSFVVEDMNIFTKKPTAKEALRESKREMTNATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMEPAKQAKVMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGVDIASQLSAAPKGRVATKNTENVGRYFLENQKEN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03703 543 Gene3D - 342 518 - -
Tsu07g03703 543 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 340 539 - -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 202 216 - -
Tsu07g03703 543 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 340 539 IPR005024 GO:0007034
Tsu07g03703 543 MobiDBLite consensus disorder prediction 217 279 - -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 41 309 - -
Tsu07g03703 543 SMART PBD_5 30 61 IPR000095 -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 286 302 - -
Tsu07g03703 543 CDD CRIB 28 62 - -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 139 173 - -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 183 201 - -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 49 80 - -
Tsu07g03703 543 Pfam Snf7 354 523 IPR005024 GO:0007034
Tsu07g03703 543 MobiDBLite consensus disorder prediction 81 109 - -
Tsu07g03703 543 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Tsu07g03703 543 Pfam P21-Rho-binding domain 29 61 IPR000095 -
Tsu07g03703 543 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03703 Tsu-Chr7 43205885 43214349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03703 K12192 - mtr:MTR_7g097180 336.65