Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03678 ATGGACAAATCCAAGCTAGCTCTATTCGGCGAGAGGCTCAAAACTAGTAGCGCTAACATGAGTCGAATCGTAAGcggaaaaatgaaagaaatactCCAAACACCGACACCGGAATCCAAGATGGTCGACGAAGCAACATCGGAAACATTAGAGGAACCAAATTGGGGTATGAATCTGAGAATCTGTGGTCTTATTAATGCTGATGAGTTTAATGGTTCAGAAGTGGTGAAAACTATTAAGAGAAAGATTAATCATAAGAGTCCTATTGTTCAGAAACATAGTCTTGATTTGTTGGAAACTTGTGCTATGAATTGTGAAAAAGTGTTTTCTGAAATTGCTTCTGAGAAACTTTTAGATGATATGGTTAGGTTGATTGAGAATAATCAAGCTGATCAGGAAAATAGAAGAAGGGCTTTTCAGTTGATTAGGGCTTGGGGTGAGTCTGAGGATATTGCTTATCTTCCTGTTTTCAGTCAAACTTATATGAGTTTGAAAGGAAGGGGTGAAACACTTGACACGGCGGGAGGAAATTCACCACCTATTCCATATGCCTCAGAGTCACATGCTTTAGATCCCCCCGAAAGATACCCAGTTCCAGAAGCAGGGCTACACGCTCTTTCTCTGGATGACCCGGCAGCCTTCTTCACTGATCATGTACCAGCATCAGTTGAAGAGAAGAAGGAGCATCTTGTGGTTGCTCGAAACAGTCTTGAATTGCTCTCTAGCATATTAAATTCTGAGGCAGAGCCAAAACCTTTAAAGGAAGATTTAACGTTGACTCTGCTGGATAAGTGCAAGCAGTCACTCTCTGTTATCAAGGATATTGTGGAAAGCACCACAAATGATGAAGAGACACTATTTGAGGCTTTATATCTCAATGATGAGCTGCAACAGTTGGTTTCTAAGTATGAGGAGTTGGAAGCTTCTCAAAGGCCAGGTGTACAACAAACACCAAATGCTGACACTGCCAAGCATGATGCTGGAGCTGTTCAAAATTCCAATGAAAgatttgaagatgatgaatctgaagAGACAGAAGCTGGTCAGGATCTTGATCGAAAGCTGCCCCAAAAGTCAAACACTCTTGAAGTTAATGTCAATGCAACTGAGGTGGATGGCCATGTTGAAACCAAAATAGTGGATAGCGCAAAAGTGGATGGTCATGTTGAAACCAAAATAGTGGATAGCACAAAAGAGCAGAATGGAGAACCAAGCCTCCTCAAGAGTAATACCGAATGA 1239 0.4027 MDKSKLALFGERLKTSSANMSRIVSGKMKEILQTPTPESKMVDEATSETLEEPNWGMNLRICGLINADEFNGSEVVKTIKRKINHKSPIVQKHSLDLLETCAMNCEKVFSEIASEKLLDDMVRLIENNQADQENRRRAFQLIRAWGESEDIAYLPVFSQTYMSLKGRGETLDTAGGNSPPIPYASESHALDPPERYPVPEAGLHALSLDDPAAFFTDHVPASVEEKKEHLVVARNSLELLSSILNSEAEPKPLKEDLTLTLLDKCKQSLSVIKDIVESTTNDEETLFEALYLNDELQQLVSKYEELEASQRPGVQQTPNADTAKHDAGAVQNSNERFEDDESEETEAGQDLDRKLPQKSNTLEVNVNATEVDGHVETKIVDSAKVDGHVETKIVDSTKEQNGEPSLLKSNTE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03678 412 MobiDBLite consensus disorder prediction 310 329 - -
Tsu07g03678 412 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Tsu07g03678 412 ProSiteProfiles GAT domain profile. 221 308 IPR004152 GO:0035091|GO:0043130
Tsu07g03678 412 SUPERFAMILY GAT-like domain 193 307 - -
Tsu07g03678 412 Gene3D - 28 181 IPR008942 -
Tsu07g03678 412 MobiDBLite consensus disorder prediction 398 412 - -
Tsu07g03678 412 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Tsu07g03678 412 Gene3D - 215 311 IPR038425 -
Tsu07g03678 412 Pfam GAT domain 234 307 IPR004152 GO:0035091|GO:0043130
Tsu07g03678 412 CDD VHS 39 165 - -
Tsu07g03678 412 PANTHER TOM1-LIKE PROTEIN 1 1 360 IPR044836 GO:0035091|GO:0043130|GO:0043328
Tsu07g03678 412 MobiDBLite consensus disorder prediction 307 372 - -
Tsu07g03678 412 Pfam VHS domain 38 148 IPR002014 GO:0035091|GO:0043130
Tsu07g03678 412 PANTHER TOM1-LIKE PROTEIN 2 1 360 - -
Tsu07g03678 412 MobiDBLite consensus disorder prediction 393 412 - -
Tsu07g03678 412 Coils Coil 289 309 - -
Tsu07g03678 412 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03678 Tsu-Chr7 42976445 42981072 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03678 - - mtr:MTR_7g097010 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03678 07 42976445 42981072 Tsu07g03678 07 42976445 42981072 ECH