LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g03658	ATGAATTCCGATGTTGATCCCGGCGAAATCACTCCACCGTCGACGACGGAGGAATCATCGTCACCAACATCATCACCGTCATCAATCTTAATCCCTGGTCTTCCAAACGAAGTATCACGAACAATTCTCTCAATGATTCCTTACGCTCATCACGCTCGTTTGAAATCAACTTCAAAATCATGGAAATCAGCACTTTCATCAAAATCATTTCTCAACAATCTCATAAATCATAACCGTAACAATCTTATTTGTATTTTCCCTCAAGATCCTTCAATTTATACACCTTATCTTTTCGACGTTAACGCCGTTGCTTGGTGTCCACTTCCACCTATGCCATGTAACCCTCACGTTTACGGTTTATGTAACTTCGCTGCCGTTCCATTAGGTTTTCATATTTACATAATCGGTGGTTCTCATTTTGATGCTCGTTCTTTTCCGATTAATCGTCCTTCGTCTTCTTCGTCGATGTTTCGTTTTAATTTGAGAGATTTTACTTGGGAGAATCGTGCTTCTATGATTTGGCCACGTGGTAGTTTCGCTTATGCTGTGATTCGTTCCTCTGGTGATGATAATATTATTGTTGCTGGAGGTGGATCGCGGCATATGTTATTTGGTGCTGCTGGATCTCGGATTCGATTGGTGGAGCGTTATGATGTTGTGGCGGATCGGTGGGAAGAGTTGGAGCCTCTTCCGGGGTTACGTGCTGGGTGTGTTGGGTTTTTGGAGAGGGGAGAGAGGGAGTTTAGAGTGGTTGGTGGTCATAGTCGTTCGAGGACTGTTTCGGGGGTTTTTCCGATGGATGAGCATTGTAGGAATGCAGTTGTGATGGGATTGGAGGACGGTGTGTGGCGTGAGGGTGGTGCTATGTGGGATGATAGGGAGAATGTTAGGGCTGGGAAGATGGTTgttggtgatgattgtggttcTCCTTTGGTTTTCATGATTGATGTGAATGAGATCTTCAGATATGACATGTCTTCAAATCGTTGGGTATATGAGTCTCATGTGCCAGAAAAAGCTCTCCGTGGTTCAGCCTTTGGTATTGTAGTAGTAGCTGGCGAGCTGTATGTATTGACGCATTTATATGGTGATGAATTCACAGAAGCTCGAAGGTCCAGGCGCTCTAAGAAGACAGGAACTATGTGCTTTCAAATCTATAATCCGAAAAAGAAGGCGTGGAGAACACGGGTCACAAAGTCGCCTTTCGCTTGCCATGTAGATATTAAAAGTCCCGCTGTATTGAGCTCAATCTGTCTGTGA	1260	0.4357	MNSDVDPGEITPPSTTEESSSPTSSPSSILIPGLPNEVSRTILSMIPYAHHARLKSTSKSWKSALSSKSFLNNLINHNRNNLICIFPQDPSIYTPYLFDVNAVAWCPLPPMPCNPHVYGLCNFAAVPLGFHIYIIGGSHFDARSFPINRPSSSSSMFRFNLRDFTWENRASMIWPRGSFAYAVIRSSGDDNIIVAGGGSRHMLFGAAGSRIRLVERYDVVADRWEELEPLPGLRAGCVGFLERGEREFRVVGGHSRSRTVSGVFPMDEHCRNAVVMGLEDGVWREGGAMWDDRENVRAGKMVVGDDCGSPLVFMIDVNEIFRYDMSSNRWVYESHVPEKALRGSAFGIVVVAGELYVLTHLYGDEFTEARRSRRSKKTGTMCFQIYNPKKKAWRTRVTKSPFACHVDIKSPAVLSSICL	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g03658	419	PANTHER	F-BOX/KELCH-REPEAT PROTEIN OR23	14	418	-	-
	Tsu07g03658	419	Pfam	Kelch motif	189	231	IPR006652	GO:0005515
	Tsu07g03658	419	Pfam	Kelch motif	120	172	IPR006652	GO:0005515
	Tsu07g03658	419	PANTHER	F-BOX/KELCH-REPEAT PROTEIN OR23	14	418	-	-
	Tsu07g03658	419	Pfam	F-box domain	33	70	IPR001810	GO:0005515
	Tsu07g03658	419	MobiDBLite	consensus disorder prediction	1	31	-	-
	Tsu07g03658	419	SMART	kelc_smart	131	186	IPR006652	GO:0005515
	Tsu07g03658	419	SMART	kelc_smart	191	243	IPR006652	GO:0005515
	Tsu07g03658	419	ProSiteProfiles	F-box domain profile.	28	74	IPR001810	GO:0005515
	Tsu07g03658	419	Gene3D	-	75	408	IPR015915	GO:0005515
	Tsu07g03658	419	SUPERFAMILY	F-box domain	30	115	IPR036047	GO:0005515
	Tsu07g03658	419	SUPERFAMILY	Kelch motif	86	396	IPR015915	GO:0005515

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g03658	-		-	mtr:MTR_7g096420	620.157

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu07g03658	07	42816721	42821328	Tsu07g03658	07	42816721	42821328	ECH