Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03643 ATGGCTACATCAATCTCAAACATTCTCACAGTCTTTCCCAAAACCGAATCCACTTTCTTCTTTAGATCCAATTCCAGCCATCTCAAATCACAAACAACAAAACTACTAACCCTAACACCAAAAAAACTCACCACAAAATGCAACGCAACACAAACCACAAAACAATTGTCAAAACTAACCGAACTACCAATAGAAAAAGCATGGCGCAAAATCCATGGAGAGGACAATTGGGACGGGCTTCTCGAGCCAATGGACCCAATAATGAGATCGGAACTAATCCGTTACGGAGAAATGGCCCAAGCATGTTACGACGCTTTTGATTTTAACCCGTATTCAAAATATTGTGGTAGTTGTAAACACTCACACCATGAATTTTTTCCATCGTTAGATCTTCCACACATAGGGTATACCATAACACGCTACCTCTATGCCACTGCAAATGTTAACATCCCagatttctttaaaaaatctCGATGGCCAGATAAATATTGGTCGGAACATGCAAATTGGATGGGATACATTGCCATTTCAGACGatgaaacaacaaaacaaatagGTCGGAGAGACATCATTATCGCTTGGCGAGGAACCGTTACTCATGTCGAATGGGTAGCGAATCTTCAAAATTTCCTTAAACCGATTTACCAAGACATTCCTTGTCCCGACAATGATGTTAGAGTAGAAGCAGGTTTTCTTGATATGTACACCGATCGACAAACGAAAGACGATTATTGTAAATTCTCAGCGAGGGAACAAGTTTTAGGTGAATTGAAAAGGTTGTTAGAGAAATTTCCTAACGAGGAAGTTAGTATTACATTAACAGGACATAGTTTAGGAAGTGCTATGGCAACTTTAAGTGCTTTTGATATAGCGGAAACAAAGTTAAACATTAGGGAAAATGGGGAAAAAATTCATGTTTCAGTTTTTTCATTTTCGGGGCCTAGGGTTGGGAACGTGAAATTTAAAGGGAGGTTGGAATCACATTTAGGTGTTAAGGTTTTGAGGGTTCATAACAAACATGATATGGTTCCAAAGTCTCCTGGGATTTTTATTAATGAAACTTCGCCGCCGTGGTTGTTGAAGATTGCGGAGGATATTGATATTCCGTGGTGTTATACTCATGTTGGAGTGGAATTAGAATTGGACCACAAGATTTCACCATTTTTGATTCCTGATGTGGATGCTGCATCTGCCCACAACTTGGAAGCACACTTACATATACTTGATGGGTACGTCTTTTGCCTTCATATCAAATCACCATTCACCACGCAATCTCATATGATGTTCATCTTTCCTTTTTTGGATtag 1308 0.3846 MATSISNILTVFPKTESTFFFRSNSSHLKSQTTKLLTLTPKKLTTKCNATQTTKQLSKLTELPIEKAWRKIHGEDNWDGLLEPMDPIMRSELIRYGEMAQACYDAFDFNPYSKYCGSCKHSHHEFFPSLDLPHIGYTITRYLYATANVNIPDFFKKSRWPDKYWSEHANWMGYIAISDDETTKQIGRRDIIIAWRGTVTHVEWVANLQNFLKPIYQDIPCPDNDVRVEAGFLDMYTDRQTKDDYCKFSAREQVLGELKRLLEKFPNEEVSITLTGHSLGSAMATLSAFDIAETKLNIRENGEKIHVSVFSFSGPRVGNVKFKGRLESHLGVKVLRVHNKHDMVPKSPGIFINETSPPWLLKIAEDIDIPWCYTHVGVELELDHKISPFLIPDVDAASAHNLEAHLHILDGYVFCLHIKSPFTTQSHMMFIFPFLD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03643 435 Pfam Lipase (class 3) 191 349 IPR002921 GO:0006629
Tsu07g03643 435 Gene3D alpha/beta hydrolase 67 424 IPR029058 -
Tsu07g03643 435 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 411 - -
Tsu07g03643 435 SUPERFAMILY alpha/beta-Hydrolases 83 372 IPR029058 -
Tsu07g03643 435 CDD Lipase_3 141 383 - -
Tsu07g03643 435 PANTHER PHOSPHOLIPASE A1 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03643 Tsu-Chr7 42658126 42659930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03643 61 411 Acyl Lipid Metabolism Gene Families AT2G30550 60.674 1.43e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03643 - - cam:101506071 697.582