Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03638 ATGGCTATTGCACTGAAATCATTTTGCTTCTTACACTTGAAGAAACCAGAAACAGATTTTCGAGTCGGTTTTTCTTCCAAGAAAGCTACAATAATTTCAGTTAAAAGATACACTTCGGTGTCTGCTAGTGCTATCAGAACCACTGAAGCAGTTAGTATCTCTGAAACATTCAAAAAGCTGAAGAAACAAGGAAAAGTGGCATTAATTCCGTACATCACAGCTGGTGATCCTGATCTTTCAACCACAGCAGAAGCATTGAAAGTTCTTGATTCATGTGGATCTGACATTATCGAGCTCGGTGTTCCATACTCCGATCCTTTGGCTGATGGTCCTGTTATTCAGGCTGCTTCAACAAGATCTTTATCAAGAGGGACCAATTTTGATTCAATTATTTCAATGTTGAAGGAGGTAGTTCCAGAATTATCTACTCCAATTGCATTGTTTACTTATTACAATCCAATATTGAAGCGTGGTACCGAGAAATTTATGTCTATTGTAAGAGACACCGGTGTTCATGGGCTTGTAGTCCCTGATGTTCCTCTGGAGGAGGCAGAAATTATAAGGACAGAAGCTAAGAAGAAAGGAATTGAACTTGTACTCCTCACAACACCTACCACACCGGCAAACCGAATGAAAGCCATCGTTGATGGTGCGGAAGGATTCGTGTATCTTGTGAGTTCTTTGGGGGTCACCGGAACTCGAGCATCAATTAGCGGTAAAGTTCAAGCTCTTCTGAGGGAAATCAAAGAGTCAACAACTAAGCCTGTCGCGGTAGGATTTGGGATATCAACAGCTGAGCAAGTGAAGCAGGTGGCGGGATGGGGAGCTGATGGTGTGATTGTTGGAAGTGCTATGGTGAAGTTGCTTGGTGAGgccaaaactcctgaagagggATTGAAAGAACTGGAAAATTTCACCCTCTCCTTAAGATCAGCACTTGATTGA 945 0.4116 MAIALKSFCFLHLKKPETDFRVGFSSKKATIISVKRYTSVSASAIRTTEAVSISETFKKLKKQGKVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAASTRSLSRGTNFDSIISMLKEVVPELSTPIALFTYYNPILKRGTEKFMSIVRDTGVHGLVVPDVPLEEAEIIRTEAKKKGIELVLLTTPTTPANRMKAIVDGAEGFVYLVSSLGVTGTRASISGKVQALLREIKESTTKPVAVGFGISTAEQVKQVAGWGADGVIVGSAMVKLLGEAKTPEEGLKELENFTLSLRSALD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03638 314 TIGRFAM trpA: tryptophan synthase, alpha subunit 57 309 IPR002028 GO:0004834|GO:0006568
Tsu07g03638 314 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 48 314 - -
Tsu07g03638 314 Gene3D Aldolase class I 51 314 IPR013785 -
Tsu07g03638 314 ProSitePatterns Tryptophan synthase alpha chain signature. 97 110 IPR018204 GO:0004834
Tsu07g03638 314 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 48 314 IPR002028 GO:0004834|GO:0006568
Tsu07g03638 314 SUPERFAMILY Ribulose-phoshate binding barrel 53 293 IPR011060 -
Tsu07g03638 314 CDD Tryptophan_synthase_alpha 67 310 IPR002028 GO:0004834|GO:0006568
Tsu07g03638 314 Hamap Tryptophan synthase alpha chain [trpA]. 63 312 IPR002028 GO:0004834|GO:0006568
Tsu07g03638 314 Pfam Tryptophan synthase alpha chain 57 307 IPR002028 GO:0004834|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03638 Tsu-Chr7 42603715 42605797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03638 K01695 - gmx:100808400 482.256