Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03622 ATGGATTGGCTTTCTAAGATTTGCACAattgtgacaatttttttaggTAGCATAATCCATCATGCATTCACTCTTTCACTTAATTTACACGATGTTGAATGTGTATCAGAAAATGTTCCACATGATGGTGATACAGTTTCAGGAAATTTTGTAGTCATGGATCATGATATATTTTGGAGCTCAGATCATCCTGGAATCAATTTCACCGTGACATCTCCGGGAGGAAATGTGGTGCATTCTTTGAAGGGAACATCAGGGGACAAGTTTGAGTTCAAAGCCACAAAAAGTGGAATTTACAAATTCTGTTTTTACAATCCTATTACTACACCAGAAACTGTCTCCTTTTATGTTCATGTTGGCCACATTCCAAATGAACATGACTTAGCTAAAGATGAGCATTTGGATCCAATTAATGTGAAGATTGCAGAGTTGAGAGAAGCATTAGAATCTATTATAACAGAACAAAAGTTCTTGAAAGCACGCGATGCTAGACATCGACATACAAATGAGAGCACAAGAAAACGTGTAGTAGTTTATACACTATTGGAGTATATTTTATTCGTTACTACAAGTATATTGCAAGTGGTATACATTCGTCGTCTCTTCAGCAAATCATTTGCTTACAATCGGGTTTAG 636 0.3522 MDWLSKICTIVTIFLGSIIHHAFTLSLNLHDVECVSENVPHDGDTVSGNFVVMDHDIFWSSDHPGINFTVTSPGGNVVHSLKGTSGDKFEFKATKSGIYKFCFYNPITTPETVSFYVHVGHIPNEHDLAKDEHLDPINVKIAELREALESIITEQKFLKARDARHRHTNESTRKRVVVYTLLEYILFVTTSILQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03622 211 Pfam emp24/gp25L/p24 family/GOLD 22 202 IPR009038 -
Tsu07g03622 211 SMART EMP24_GP25L_2 22 203 IPR009038 -
Tsu07g03622 211 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 4 207 - -
Tsu07g03622 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 207 IPR015720 -
Tsu07g03622 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 43 128 IPR036598 -
Tsu07g03622 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Tsu07g03622 211 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03622 Tsu-Chr7 42443139 42444318 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03622 K20347 - gmx:100789501 357.066