Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03604 ATGTCATCGTCTCTGATATCGGATTTTCTCCGCCAAACCGGCGGAACTGCCATCATCGACGGCGGTCTGGCTACAGAACTTGAACGCCATGGCGCAGACCTCAACGATCCTCTTTGGAGCGCCAAATGCCTCATTTCTACTCCTCAGTCTAACCTCATTCGCCAGGTACATCTTGATTACTTGGAAAATGGTGCTGACATTATAACCACAGCATCATATCAAGCTACTATTCAAGGTTTTAAGGAAAAAGGATTTTCTGATAAAGAAGGTGAAAACATGCTAAGAAGAAGTGTTGAAATTGCTTGCGAGGCGCGTGATTTGTATTATGAAAGATGTGTTGCATGCTCTTCGGGTGATAAGACTGATGGTAGAATCCTCAAGAAACGTACTATTCTGATTGCAGCATCAGTTGGGAGCTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGATTTATGGTGATGCTATCACATTGGCAACTCTCAAAGATTTTCATCGAAGAAGAGTTCAAATTTTGGCAGATTCGGGTGCAGACCTGCTTGCATTTGAAACAATTCCAAATAAGATTGAAGCTCAGGCTTATGCAGAACTTCTAGAAGAAGAGAACATAAAGATTCCAGCATGGTTTTGTTTTAACTCTAAGGATGGAATTAATGTTGTTAGTGGTGATTCTCTGGTGGAATGTGGTTCCATTGCTGAGTCATGCAAGAAAGTCGTCGCTGTTGGAATCAATTGTACCCCACCTAGATTTATACACGGTCTTATACTTCTTCTTAAGAAGGTGACTACAAAACCAATTGCTATATATCCAAATAGCGGGGAAACTTATGATGGTGATAGAAAAGAGTGGGTGCAAAATACAGGTGTTACAAATGAAGATTTTGTCTCGTATGTTAGTAAATGGTGTGAGTTAGGGGCTTGCCTTGTAGGTGGCTGTTGTAGAACAACTCCTGTTACCATTAGAGGGATATACAAGACACTATACAACAGTCAATCTGCTACTCATGCTACAAAGTAA 1023 0.4125 MSSSLISDFLRQTGGTAIIDGGLATELERHGADLNDPLWSAKCLISTPQSNLIRQVHLDYLENGADIITTASYQATIQGFKEKGFSDKEGENMLRRSVEIACEARDLYYERCVACSSGDKTDGRILKKRTILIAASVGSYGAYLADGSEYSGIYGDAITLATLKDFHRRRVQILADSGADLLAFETIPNKIEAQAYAELLEEENIKIPAWFCFNSKDGINVVSGDSLVECGSIAESCKKVVAVGINCTPPRFIHGLILLLKKVTTKPIAIYPNSGETYDGDRKEWVQNTGVTNEDFVSYVSKWCELGACLVGGCCRTTPVTIRGIYKTLYNSQSATHATK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03604 340 PIRSF BHMT 279 337 IPR017226 GO:0008168|GO:0008270|GO:0009086
Tsu07g03604 340 PIRSF BHMT 9 225 IPR017226 GO:0008168|GO:0008270|GO:0009086
Tsu07g03604 340 PANTHER ZGC:172121 2 335 - -
Tsu07g03604 340 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 335 - -
Tsu07g03604 340 Pfam Homocysteine S-methyltransferase 18 328 IPR003726 -
Tsu07g03604 340 ProSiteProfiles Homocysteine-binding domain profile. 5 329 IPR003726 -
Tsu07g03604 340 Gene3D - 6 327 IPR036589 -
Tsu07g03604 340 SUPERFAMILY Homocysteine S-methyltransferase 13 331 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03604 Tsu-Chr7 42198053 42203699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03604 K00547 - gmx:100790567 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03604 07 42198053 42203699 Tsu07g03604 07 42198053 42203699 ECH