Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03602 ATGATTAGTAGCACATTCACTCCTTGTGCTAATATCATTACAGGTAGCACTAATAATGGATTAGTACCATCAACTTCATGTTGTGATTCATTAAGGTCTTTGATGAGTACTAATATGGATTGTGCTTGTCTTATGATGTCTTCCAATAATCCAATTTTACAACTATCTATTAACCAAGCTCTTGCTATATCTCTTTCACAAGCATGCAACATTAATGGTGCATCTGTACAATGCAAAGGCCCGGCAGTTATTGGACCAAACAGCCCAACTCTCCCTTCAAGTGCTCCAACTCCCTTAAGCCCTCAAGGTAAAAACACACACAGGTATAAGAATCTGGAATTGGCAGAGGCAAGTGCATCGACACCATCATCGTCAGCACCAACGGAAGCAGCAGCACCCGCTATAACTTCAAGAATTATACCAGTTTTGACTCCTCTTCCTTCAGCATCTCCACCATCTTATTATCCCTTCTCATCACCTTCTGCAATACTATTATGTATACTCATAGTAATAGTATTGGTTTTTGGCATTCATTAA 537 0.3948 MISSTFTPCANIITGSTNNGLVPSTSCCDSLRSLMSTNMDCACLMMSSNNPILQLSINQALAISLSQACNINGASVQCKGPAVIGPNSPTLPSSAPTPLSPQGKNTHRYKNLELAEASASTPSSSAPTEAAAPAITSRIIPVLTPLPSASPPSYYPFSSPSAILLCILIVIVLVFGIH 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03602 178 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 3 171 IPR043325 -
Tsu07g03602 178 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 3 171 - -
Tsu07g03602 178 Pfam Probable lipid transfer 5 78 IPR016140 -
Tsu07g03602 178 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 4 76 IPR036312 -
Tsu07g03602 178 CDD AAI_LTSS 6 71 - -
Tsu07g03602 178 Gene3D - 1 78 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03602 Tsu-Chr7 42184963 42187885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03602 4 79 Lipid Metabolism Gene Families AT2G48140 47.368 2.03e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03602 - - mtr:MTR_7g095250 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03602 07 42184963 42187885 Tsu07g03602 07 42184963 42187885 ECH