Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03599 ATGTCTGAACTGATTGAAGGACTTCCTGATGCTGTTGCAATAAGGTGTCTTGCACGTGTTCCCTTCTACCTCCACCCAAAGTTAGAGGTTGTCTCTCGTTCTTGGCAAGCAGCCATTCGTAGTCCAGAACTATCAAAAATTCGACAGGAGGTTGCTTCATCTGAGGATCTCCTGTGTGTTTGTGCTTTTGATCCAGAGAACGTATGGCAACTGTATGATCCTCTAAGAGATCTCTGGATTACCCTTCCTGTTCTTCCCTCAAAGATCAGACACCTTTCTCACTTTGGTGCCGTATCCACAGCTGGAAAGTTGTATGTCATTGGCGGTGGAAGTGATGCTGTTGATCCTTCAACCGGTGATCATGATGGATGTTTTGCAACTGATGAAGTTTGGTCATATGATCCGATAATCAAGCAGTGGTCCCCTCGGGCTTCGATGCTTGTTCCCCGTTCTATGTTTGCGTGCTGTGTTTTGAATGGGAAAATTGTTGTCGCTGGGGGCTTCACTAGTTGTAGGAAAACAATATCTCAAGCAGAAATTTACGACCCTGAGAAGGATTTATGGACTCCAATGCCCGATCTTCATCGCACTCAAAATTCAGCTTGTTCAGGAATAGTCATTGGTGGAAAGATGCATGTACTTCACAAGGACATGTCAACAGTGCAAGTTTTAGACAATGCAGGGGCTAGATGGATGGTTGAGGAGTGTGATTGGCTTCAAGGTCCAATGACTGTAGTCCAGGATGCACTTTGTGTTATGAGCAATGGATCTATCATAAAGCAGGACAAAGAAGGGAGAAAGATTGTAAGTTCAGCAACAGATTTTAAGAAGAGAATTGGGTTTGCAATGATTGGACTTGGCGATAATTTATATATGATTGGAGGCGTCATTGGACCTGACAGATGGAATTGGGACATTAAACCATTATCAGACGTCGATGTTCTCACACTTGGGAGTGAGAGACCAGCTTGGCGCCAAGTAGCTCCAATGACAAGATGTCGTGGTACCATTGTTGGTTGTACACTGCTGAGAATTTAG 1038 0.4432 MSELIEGLPDAVAIRCLARVPFYLHPKLEVVSRSWQAAIRSPELSKIRQEVASSEDLLCVCAFDPENVWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLYVIGGGSDAVDPSTGDHDGCFATDEVWSYDPIIKQWSPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEIYDPEKDLWTPMPDLHRTQNSACSGIVIGGKMHVLHKDMSTVQVLDNAGARWMVEECDWLQGPMTVVQDALCVMSNGSIIKQDKEGRKIVSSATDFKKRIGFAMIGLGDNLYMIGGVIGPDRWNWDIKPLSDVDVLTLGSERPAWRQVAPMTRCRGTIVGCTLLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03599 345 Gene3D - 60 343 IPR015915 GO:0005515
Tsu07g03599 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Tsu07g03599 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Tsu07g03599 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Tsu07g03599 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Tsu07g03599 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Tsu07g03599 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 345 - -
Tsu07g03599 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 345 - -
Tsu07g03599 345 SUPERFAMILY Kelch motif 61 334 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03599 Tsu-Chr7 42171218 42175550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03599 8 188 Miscellaneous Gene Families AT4G33900 28.421 1.98e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03599 - - cam:101512165 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03599 07 42171218 42175550 Tsu07g03599 07 42171218 42175550 ECH