Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03580 ATGGCTTTGGATATGTCCTTTTGCCTTACTCCCATGCCTCCATCTTTTTATGTGAGACATAGAGTCAAGTCCCACTATCCTTTCAAATTATTCTTTCAATCATCTTTTCATTCTTTGAGAGGTATACATCATGTCCGAATTATCAAAGGAAAACTTGATAATAATTCTGGTGGATTGCAGCCAATACATGCAgTGGCTCAGGATATTGCACCTTCCATCAAATGGTTTGAAATTGTGAAGAAGGATGGCAAAAATGAGGAAAATTTTCATAAGGTTTTGGAGGAAAAGCAGATTAGGAAGCAGATTAATAAGGTGAAATTGATGTTGAAGTTTATGGAAGATGGAGAGATAAGCATATCAGCTTATGACACAGCTTGGGTTGCTCTTGTGaaaaatattgatgatgaaaataAGCCACAATTTCCATCTTCTCTTCAATGGATTGCTAATAATCAGCTTCCTGATGGTTCATGGGGAGATGAATTATTTTTGGCCCATGACAGAATTCTCAACACCTTGGCTTGTGTTATTGCCTTAAGATCATGGAATATCCACCCTAACAAGTGTGAAAAGGgaatgaaattttttgtggaAAATCTATACAAGCTTGAGGATGAGAATGTAGAGCACATGCCGATAGGGTTTGAAATTGTTTTCCCTTCTCTTCTCAATATAGCTCGAAGTTTGAACATTCAAATACCAGATGATTCTCCTTtcataaaagatatatttgcAATGAGAGACCAAAAACTCAGAAAAATACCAAGAGAGGTGTTGCACAATGTGCCCACAACATTGCTTCATAGTTTAGAGGGAATGCAAAATTTGGATTGGAATCAACTTCTAAAGTTGCAATCCCAAGATGGATCTTTCTTGTTCTCTCCATCCTCCACAGCTATTGCTCTTATGCAAACTAAAGATGAAAATGCTCTCAATTACTTAGCCAAAATTGTCAACAAGTTCAATGGAGGAGTTCCGAATGTCTTCCCGGTGGATTTGTTTGAACACTTGTGGGCTGTTGATAGGCTAGAACGCCTTGGAATTTCGAGATATTTTCAGCAAGAGATTGAGAACTGTGTGAATTATGTGTCAAGaTATTGGACTGATAAGGGTATTTGCTGGGCAAGAAATTCAGAAGTTCAAGATATAGATGACACAGCAATGGGATTTAGACTACTAAGGTTGCATGGTCACCAAGTTTCAGCAGATGTGTTCAAGCATTTCGAGAAAAGTGGCCAATTCTTCTGCTTTCCTGGACAGTTAAACCAAGCTGTGACAGGCATGTTCAATACATATAGAGCTTCTCAAGTGCTATTTAAAGGAGAAAAAATTCTCGAGGATGCCAAGAACTTCTCAGCCAATTTTTTAACTACGAAACGTGATGCTAATGAGCTCTTAGATAAATGGATCATAACCAAAGATTTACCTGGCGAGGTTGGTTATGCTCTAGATGTTCCTTGGTATGCTAGCTTACCTCGGTTGGAGACAAGATTTTACCTTGAACATTATGGTGGCAAAAATGATATTTGGATTGGCAAGACCCTTTACAGGATGCCATTCGTGAACAATGATGTTTATCTGGAGCTTGCAAAATTGGATTACAACAACTGTCAAGCAATGCATTGTAAAGAATGGGAAGAAGATATTCAAAGGTGGTACTTGGAATCAAAACTAGAAGGATTTGGATTGAGCAAAAAGAGTCTTCTGTTTGCTTATTATGTAGCAGCAGCTAGCATATTTGAGCCAGAGAGGTCTCTAGAACGACTTGCATGGACTAAAACAGCAGCTTTGCTCCAAACACTGAAGTCACATTTAAAAGATGAAGAAACTAGGAGCACATTTGTAGATAAGTTCAATAAATACATTAATGGAGGAGACTACTCAAACAGGTGGTTAAACAAGAACAAGAGAGAGGATAAACTCCTAGGAGTTTTGGTAACAACACTTGATCAGCTTGGCTTCCAAATGTTTTGGAATCATGACCAAGAAAATTCCAATTATTTGAATCAAATGTGGCAAAATTGGCTTTCAAGCTGGCATAATGAAGGAAACAGATCCGAAAGAGAAGCAGAACTACTTGTGCAAATCATAAATTTAACAGCTGGCTATTGGCCAGAAGAACTACAGTCCAATCCTCAGTACCAGAAATTGCTTGAAGTCACTAACAGAGTCTGTACTAGTCTCTGTAATTGCCAAAGCAACAAGGCACATACTAGCATCAATAGCCCCCAAATAGAGTCAGAAATGCAAGAACTTGTGCAACTGGTACTTCAAAATTCTCCAGATAGCTTGCACTCCAATATCAAGAATTCATTCCTCATGGTGGCCAAGAGTTTCTACTATGAAGCATACTGTGACCCAGAGACCATTTACTCTCATATTGATAAAGTTCTCTTTCAAAAAGTCAACTGA 2412 0.3756 MALDMSFCLTPMPPSFYVRHRVKSHYPFKLFFQSSFHSLRGIHHVRIIKGKLDNNSGGLQPIHAVAQDIAPSIKWFEIVKKDGKNEENFHKVLEEKQIRKQINKVKLMLKFMEDGEISISAYDTAWVALVKNIDDENKPQFPSSLQWIANNQLPDGSWGDELFLAHDRILNTLACVIALRSWNIHPNKCEKGMKFFVENLYKLEDENVEHMPIGFEIVFPSLLNIARSLNIQIPDDSPFIKDIFAMRDQKLRKIPREVLHNVPTTLLHSLEGMQNLDWNQLLKLQSQDGSFLFSPSSTAIALMQTKDENALNYLAKIVNKFNGGVPNVFPVDLFEHLWAVDRLERLGISRYFQQEIENCVNYVSRYWTDKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSADVFKHFEKSGQFFCFPGQLNQAVTGMFNTYRASQVLFKGEKILEDAKNFSANFLTTKRDANELLDKWIITKDLPGEVGYALDVPWYASLPRLETRFYLEHYGGKNDIWIGKTLYRMPFVNNDVYLELAKLDYNNCQAMHCKEWEEDIQRWYLESKLEGFGLSKKSLLFAYYVAAASIFEPERSLERLAWTKTAALLQTLKSHLKDEETRSTFVDKFNKYINGGDYSNRWLNKNKREDKLLGVLVTTLDQLGFQMFWNHDQENSNYLNQMWQNWLSSWHNEGNRSEREAELLVQIINLTAGYWPEELQSNPQYQKLLEVTNRVCTSLCNCQSNKAHTSINSPQIESEMQELVQLVLQNSPDSLHSNIKNSFLMVAKSFYYEAYCDPETIYSHIDKVLFQKVN 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03580 803 SFLD Terpene Cyclase Like 1 N-term 91 517 - -
Tsu07g03580 803 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 87 800 - -
Tsu07g03580 803 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 91 517 - -
Tsu07g03580 803 Gene3D Farnesyl Diphosphate Synthase 537 803 IPR008949 -
Tsu07g03580 803 SUPERFAMILY Terpenoid synthases 522 799 IPR008949 -
Tsu07g03580 803 Gene3D - 121 332 - -
Tsu07g03580 803 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 87 800 - -
Tsu07g03580 803 Pfam Terpene synthase family, metal binding domain 527 684 IPR005630 GO:0000287|GO:0010333|GO:0016829
Tsu07g03580 803 Pfam Terpene synthase, N-terminal domain 277 483 IPR001906 GO:0010333|GO:0016829
Tsu07g03580 803 Gene3D - 104 535 IPR036965 GO:0010333|GO:0016829
Tsu07g03580 803 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 122 303 IPR008930 -
Tsu07g03580 803 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 288 508 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03580 Tsu-Chr7 42002097 42007784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03580 K04120 - gmx:100807519 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03580 07 42002097 42007784 Tsu07g03580 07 42002097 42007784 ECH