Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03573 atgatggtgatgatgagtGTTCAATTTCAACTATCATCATCATGCTTATGGCTTCCAAACTCTCCATCTCCACCAATTTCTCCACTTTTTCGTACTACCAGATTCTCATCTTCACCTCTCGCTGCCACACCAACCTTCTCTTCTCAATCTCCCACCATTCAGATAATTGGCAACAATAGATTTGATGGTAGTAACCAAGGAGACACTAATCTTTGGACTGATCTTGACACTGATCTTTATCATTGGACAAAGGTTTTACGCCCCGTGCAGTGGTTTCCTGGTCATATTGCAAAAGCAGAAAAGGAATTAAAGGAACAGCTTAAGTTGATGGATGTTGTTATAGAGGTGCGAGATGGACGAATTCCGATGTCTACAAGTCATCCACAGATGGATCTATGGCTTGGTAATAGAAAGAGAGTTTTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGATCGAAATGCTTGGGCCGAATATTTTACTAGGCGTGGAACAAAGGTTGTCTTCTCCAATGGACAGCTTGGAATGGGCACGATGAAGCTAGGCCGGTTAGCAAAGGAGTTAGCAGCTGATGTAAATGTTAAAAGGAGAGCCAAAGGTCTACTTCCTCGTCCGGTTCGAGCTGGAATTGTTGGATACCCTAACGTTGGAAAATCGTCTTTGATCAACCGTTTGTTAAAGCGAAGAATGTGCCCAGCAGCTCCAAGGCCAGGAGTTACAAGAGATTTAAgGTGGGTTCGATTTGGGAAAGATCTTGAATTGCTGGATTCTCCTGGGATACTTCCTATGCGAATCAGTGACCAGTCAGCGGCTATAAAACTTGCAATATGTGATGACATTGGAGAGAGGTCCTATGATGTGGCTGATGTTGCTGGAATTCTTGTACAGATGCTTACAAAGTTTCCAAAAGTAGGTCGAGACGTGCTTTGTAAACGATACAAGATTGACGAAGACAGTGAATGTGGTAAAATATTCATAGAGAAGCTGGCCATTCACTTGTTCAATGGAGATGTTAATCATGCAGCATACCGTGTCCTGTCAGATTTTAGAAAAGGTAGGTTTGGTTGGACTGCATTGGAGAGACCTCCTAGGTGA 1098 0.4189 MMVMMSVQFQLSSSCLWLPNSPSPPISPLFRTTRFSSSPLAATPTFSSQSPTIQIIGNNRFDGSNQGDTNLWTDLDTDLYHWTKVLRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDLWLGNRKRVLVLNREDMISTADRNAWAEYFTRRGTKVVFSNGQLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAGILVQMLTKFPKVGRDVLCKRYKIDEDSECGKIFIEKLAIHLFNGDVNHAAYRVLSDFRKGRFGWTALERPPR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03573 365 Gene3D - 89 262 IPR027417 -
Tsu07g03573 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 331 IPR027417 -
Tsu07g03573 365 PANTHER DAR GTPASE 3, CHLOROPLASTIC 61 365 - -
Tsu07g03573 365 CDD YlqF 91 262 - -
Tsu07g03573 365 PRINTS GTP1/OBG GTP-binding protein family signature 209 229 IPR006073 GO:0005525
Tsu07g03573 365 PRINTS GTP1/OBG GTP-binding protein family signature 255 270 IPR006073 GO:0005525
Tsu07g03573 365 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 61 365 - -
Tsu07g03573 365 Gene3D - 267 355 IPR023179 -
Tsu07g03573 365 TIGRFAM GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 89 361 IPR019991 -
Tsu07g03573 365 Pfam 50S ribosome-binding GTPase 209 269 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03573 Tsu-Chr7 41903838 41907671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03573 K19828 - gmx:100784201 566.614