Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03564 ATGGAATCAACTCATCATGTTATATCCATTACAAATGAAGAAGATAGCAACAACAATATTGCTCAaatgaagaaagaaacaaacactcatattggaaaaaataaaatcaactttTCTTTTGTTCTAAGAGACAACAATAAGAAGAAGATCATAAAAAGTGACCATGACATTAAGAAGATGATTCATAGCATCAAAGTTGGACTCTCACTTGTTTTGGTTTCACTTCTTTACATTATAAATCCTCTCTTTGATCAAGTTGGTGAAAATGCAATGTGGGCTATTATGACTGTTGTTGTCATCTTTGAATTCAATGCAGgtgcTACACTTGGAAAAGGCTTCAACCGTGGGATAGGGACTATTGTTGGAGGAGGATTGGGATGCTTAGCAGCAATTTTGGCACAAAACATTGGAGGAGTTGGCAACTCAATTTTCATTAGTACTTCAGTATATATCTTTGGATCAGTTGCAACATATTTTCGACTAGAGTTAAAGTTTGGGGAAATAGCAAGAGAACGTGATGAACTTCATGATTCTATTGTCTCAAGATTCCACCATCTTGCAAATACAATTCAAGGTTGCTTAGAGGAATGTTCAAAATCAGTCAAGGAAAgggaaaatcaaactgatactACCAACTTCACAGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTTGCAAGATGGGAACCTTGGCATGGAAAATTTGGATTTTCCTACCCATGGGAAAAGTACTTAAAGATTGGAGAGGTTCTTCGAGAACTAGCTACACTTATTCTTGCATTGGAACGTTGCCTCCTAGCCTCAAAAAATCCCACTGCATCTTTGAAGCGATCAAAAGCTCAATTAGAACAGTGTGAAGCAATTGGGTCAAGGGTTGTTTGGACTCTACGAGAAGTTGGAGATAGcatgaaaaaaatgagaaaatgtgAAGAAAGAGAAGACATTATagctaagttgaaaacaactAGAGAAGAGTTGAGTTTGGTGATTTCAACATCCAATATTTCAGAATTTGAGAATGGTGAAATGCTAGCAATTGCAAGCTTGGTGTTTTTGCTTATGGAAGTGGTGGAGAAGGTAGGTGAATTGGTTATTGAGGCCGGGGAACTTCAAGATAAAGCCGGTTTTCGCATCCGCGTAACTCCAGTGTCTTCATAA 1179 0.3444 MESTHHVISITNEEDSNNNIAQMKKETNTHIGKNKINFSFVLRDNNKKKIIKSDHDIKKMIHSIKVGLSLVLVSLLYIINPLFDQVGENAMWAIMTVVVIFEFNAGATLGKGFNRGIGTIVGGGLGCLAAILAQNIGGVGNSIFISTSVYIFGSVATYFRLELKFGEIARERDELHDSIVSRFHHLANTIQGCLEECSKSVKERENQTDTTNFTVCKSVLNSKSKDESLANFARWEPWHGKFGFSYPWEKYLKIGEVLRELATLILALERCLLASKNPTASLKRSKAQLEQCEAIGSRVVWTLREVGDSMKKMRKCEEREDIIAKLKTTREELSLVISTSNISEFENGEMLAIASLVFLLMEVVEKVGELVIEAGELQDKAGFRIRVTPVSS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03564 392 Pfam Aluminium activated malate transporter 55 161 IPR020966 GO:0015743
Tsu07g03564 392 Pfam Aluminium activated malate transporter 173 339 IPR020966 GO:0015743
Tsu07g03564 392 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 173 384 - -
Tsu07g03564 392 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 173 384 - -
Tsu07g03564 392 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 5 161 - -
Tsu07g03564 392 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 5 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03564 Tsu-Chr7 41809748 41812397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03564 56 373 Miscellaneous Gene Families AT1G08440 31.117 1.75e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03564 - - gmx:100779890 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03564 07 41809748 41812397 Tsu07g03564 07 41809748 41812397 ECH