Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03561 ATGAAGCTCGTTAGGTTTCTCATGAAGTTGAACAATGAAACCGTTTCAATCGAGTTAAAGAATGGTACTATTGTTCACGGCACCATTACAGGTGTTGATATCAGTATGAATACACATTTGAAAACAGTTAAGCTAACTCTAAAGGGGAAAAATCCAGTTACTTTGGATCATCTCAGTGTAAGAGGCAACAACATTCGTTATTATATCCTACCCGACAGCTTGAATCTCGAAACTTTACTGGTTGAAGAGGCTCCTAGGGTCAAGCCTAAGAAGCCAACTGCTGGGAAGCCTTTGGGGAGAGGACGGGGCCGAGGGCGTGGACGCGGTCGTGGTCGCGGCCGTTAA 345 0.4522 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03561 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 110 IPR027141 GO:0006396
Tsu07g03561 114 Gene3D - 50 82 - -
Tsu07g03561 114 Gene3D - 1 49 - -
Tsu07g03561 114 Pfam LSM domain 5 69 IPR001163 -
Tsu07g03561 114 SMART Sm3 5 70 IPR001163 -
Tsu07g03561 114 MobiDBLite consensus disorder prediction 83 114 - -
Tsu07g03561 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Tsu07g03561 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 1 110 - -
Tsu07g03561 114 MobiDBLite consensus disorder prediction 93 114 - -
Tsu07g03561 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03561 Tsu-Chr7 41794962 41797682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03561 K11087 - jre:109010907 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03561 07 41794962 41797682 Tsu07g03561 07 41794962 41797682 ECH