Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03555 atgttccCTCTAAACCTTACCGGAAACAACACCGTTTTCCCGCCGGATTCGTTTGTTTACGACGCCGACGATATTCCGTTTGGTACAGTATGGTGGTTTGTTTACGCTGGAATTTCATGTTTACTTGTTATCTTTGCTGGTATTATGTCTGGTCTTACTCTTGGATTAATGTCTTTGGATTCTGTTGGTCTTGAAATTCTTCAAAGAAGTGGTTCTTTCACTGAGAAAAAACAAGCTGCTGCAATTTATCCTGTTCTTCAAAAACAACACCAGCTGCATGTTACTTTGCTTCTTTGCAATGCTCTTGCTATGGAGGCACTTCCGCTTTACCTTGATAAACTTTTTCATCCTGTTGTAGCAGTGTTACTATCAGTAACTTTTGTTCTGGCTTTTGGAGAGGTCATCCCACAAGCCATATGCACAAGATATCGCCTCTATGTTGGAGCAACATTTATCGGGCTTGTACGTGTCCTGATGTTCATCTGTTATCCAATTGCATACCCTATTGGAAAGGTTATGGATCTTTTGCTTGGACACGATGATGTACTGTTTAGGCGAGCACAATTGAAAGCCCTTGTTTCAATCCATAGTGAAGAGGCTGGTAAAGGAGGTGAACTCACACATGACGAGGCGACGATTATCAGTGGAGCACTAGATCTCACTCTGAAGACTGCCGAGGAGGCTATGACACCAATTGAGTCAACTTTTTCCTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGAACGAGGTCATAGTCGTATCCCCGTATACAGTGGAAACCCCAAAAATATAATTGGTATTTTACTAGTAAAAAATCTTCTTACTTTAAGAGCTGAGACGGAGTGTCTAGTTAGTTCTGTTTCCCTCCGGAAAATTCCCAGGGTTCCAGCAGATATGCCTTTATATGATATCCTCAACGAGTTTAAAAAAGGAAACAGCCATATGGCAGCTGTAGTCAAGATTATAAGAGAGAAAAACAACCCTCAGGCAGCTGGTGACTTCGACAAATACAACGATGAAGTAGGTATCAAACATAGTTCTCAACTGACTGTGCCATTGCTAGCCGGGTCTTGTGAGAAATCAGACAATGTTGTCGATATTGACAAGCTTTCTAGGTATCATAAACCTGGAGGATACAACGAGGCGAAGAATGCCAACCAACAATGCCAAGAAAACGACACTGCACCAAATAGTTTCCACCACTTTCCTTATGATAAAGATGGGGAAGTTATTGGCATTATTACCTTGGAGGATGTTTTTGAAGAACTCCTACAGGAAGAAATTGTAGATGAGACAGATGTGTATATAGATGTACAGAGGAGAATACGTGTTGCTGCTGTCGCAGCTGCTTCATCTGTTGCACTAGGCCAAAGGTCGACGGGTCACAAGCCTGTAGGGAATCAAGCAAGCAGGTGA 1434 0.4191 MFPLNLTGNNTVFPPDSFVYDADDIPFGTVWWFVYAGISCLLVIFAGIMSGLTLGLMSLDSVGLEILQRSGSFTEKKQAAAIYPVLQKQHQLHVTLLLCNALAMEALPLYLDKLFHPVVAVLLSVTFVLAFGEVIPQAICTRYRLYVGATFIGLVRVLMFICYPIAYPIGKVMDLLLGHDDVLFRRAQLKALVSIHSEEAGKGGELTHDEATIISGALDLTLKTAEEAMTPIESTFSLDVASKLDWEAIGKILERGHSRIPVYSGNPKNIIGILLVKNLLTLRAETECLVSSVSLRKIPRVPADMPLYDILNEFKKGNSHMAAVVKIIREKNNPQAAGDFDKYNDEVGIKHSSQLTVPLLAGSCEKSDNVVDIDKLSRYHKPGGYNEAKNANQQCQENDTAPNSFHHFPYDKDGEVIGIITLEDVFEELLQEEIVDETDVYIDVQRRIRVAAVAAASSVALGQRSTGHKPVGNQASR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03555 477 Pfam Cyclin M transmembrane N-terminal domain 38 209 IPR002550 -
Tsu07g03555 477 CDD CBS_pair_CorC_HlyC_assoc 224 325 IPR044751 -
Tsu07g03555 477 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 17 463 IPR045095 GO:0010960
Tsu07g03555 477 SUPERFAMILY CBS-domain pair 216 431 IPR046342 -
Tsu07g03555 477 Gene3D - 389 437 IPR046342 -
Tsu07g03555 477 Gene3D - 210 349 IPR046342 -
Tsu07g03555 477 PANTHER BNAC05G01850D PROTEIN 17 463 - -
Tsu07g03555 477 ProSiteProfiles CNNM transmembrane domain profile. 28 210 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03555 Tsu-Chr7 41686839 41691303 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03555 K16302 - gmx:100777230 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03555 07 41686839 41691303 Tsu07g03555 07 41686839 41691303 ECH