Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03546 ATGTTGTTCTTCTCCTACTTCAAAGATTTAGTCGGAAAAGAAGTCACGGTTGAACTCAAGAACGATTTAGCCATTAGAGGAACATTGCATTCTGTTGATCAATACCTCAATATCAAGCTGGAAAATACTCGTGTTGTTGATCAAGACAAGTACCCTCACATGCTTTCTGTAAGAAACTGCTTCATCAGAGGATCCGTGGTGAGATACGTGCAATTGCCTCCAGATGGTGTGGACATTGACCTATTGCACGATGCCACAAGAAGAGAAGCCCGGGGTGGTTGA 282 0.4326 MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPDGVDIDLLHDATRREARGG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03546 93 CDD LSm2 2 90 IPR016654 GO:0006397
Tsu07g03546 93 Pfam LSM domain 7 71 IPR001163 -
Tsu07g03546 93 PIRSF Lsm2 1 93 IPR016654 GO:0006397
Tsu07g03546 93 SMART Sm3 5 72 IPR001163 -
Tsu07g03546 93 Gene3D - 1 92 - -
Tsu07g03546 93 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 91 IPR016654 GO:0006397
Tsu07g03546 93 SUPERFAMILY Sm-like ribonucleoproteins 3 92 IPR010920 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03546 K12621 - nnu:104612860 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03546 07 41574970 41579677 Tsu07g03546 07 41574970 41579677 ECH