Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03532 ATGATGACAAATGAAGAACTGTTACAGAAGATAGAAGAGTTGACCAAGAACACCAAATATCATCAATTGGAAACTCTTAActcaattcttcatcataatgGTTCTGTTAACTATCTTCAACCTTTCTTCAATAACAACAATAGTGTTGATGTTGATGATCCTGCCACTTTCAAACGTCTTGTTCCTTTGTCTTCCTATGAAGATTACGTTGACTTTATTCACCACATGGCTGATGATGAAAAACATGATCCTCTTCTCTCTGTTGATCCTCTTCTCTGTTTTTTCTATAGCTCGGGAACTACTTCCATGAAACCAAAACTGATCCCTTACTTTGATTCAACCCTTTCAAGAGCTGCCTCATTTGTTGGCCACCAGGGCAGTATGGCCGTTCTTCAAAGGTTGTTTCCTCCAAGGCCTAATATCAACAAAATCCTATGGTTTCTCTATGCTGACAAAATTACAACTACAACTAAAAGTGGCATAAAAGTTATGGCAGCTTCTTCATACCCTTTACAAAGTGGTAAGGTAACTTCTCAACAACTTGCAATGTTCTCTAGTCCCCTTGAAGTTATTCTTGGATCTAATGTTGAGCATCAAATGTATTGCCATATTCTATGTGGTCTTAGGAATCTTGATATTATAGATGGAATTAATGCTCCATATGCCATAGGTTTGGTTAAAGTATTTAGTTTTTTGGAGTCGAAATGGGACCAGCTATGTGATGATCTTGATTCTGGTTTTCCAAGTCATGAGATTTCAGATATGGAAATGAGGGAAGGTGTAATAAAAACTATTGGTGGACCTCAACATGAATTGTCAAATAGAATAAGATTAGTTTGTGAAGGTAAGAATTGGGGCGGGATTGTACGTAGATTGTTTCCTAATGTTCGGTTTATCAAATGTGTTACGACCGGAAGCATGAAGCAGTACTATCAAAAACTTAAGTTTTATGTGGGAGAAGATGTACCTATTCTTGGAGGAGATTACTTTGCTTCAGAGTGTTGTGTCGGTTTAAATTTAGACATAACGCAACCGCCTGAGACAACGCGGTTCGTAATACTTCCTACCTTTGCCTACTTTGAGTTTCTTCCATTTCAGATGAATGAGAATGAGAAAGATGTTGTTGAACAGACAGTCGACCTTACCGGGGTTGAGGTTGGGAAGATGTATGAAGTGGTTGTAACTACTTACCGAGGATTTTATCGATACAAATTAGGCGATATAGTTAGAGTTGTTGGTTTTCATAATTCATCGCCTAAGGTCGAATTTGTGATGCGAGCGCCTAAATCTTCAGCTGAGATTCTCACTGAAAAAGACTTGTTTTCAGCAGTTGAAAATTTTCAACTTGCACTTAGAAGTGCTATGGGAATTGACTCCattgagattgttgagtttgCAAGTTTCTTGGATAGAGAATCGACACCAAAGCAGTTGAAGGTATTTATAGAAGTAGAAGTCAAAGAGGAATCTAAGTTTTTGGAGGAAAGGGttaaattgtttaaaagttGTATTTCCTCTCTTGAGAGTGGTTTAGGAGCATTATACAAGGTGCAGAGAGATAAAGGTCATTTAGGGAATTTAATGATAATTATCCTAAGGCATGGAGCTTTTGATCAGTTATCTGATTTGGCTATTAAGAATGGAACATCAGCTAGTCAATATAAGCCACCTAAGATTATAAGGAATCATAAAGTTGTCAATTTCTTGGAAAAATTAGCTGTTTTTACAGTGTCAATGGatgactaa 1746 0.3608 MMTNEELLQKIEELTKNTKYHQLETLNSILHHNGSVNYLQPFFNNNNSVDVDDPATFKRLVPLSSYEDYVDFIHHMADDEKHDPLLSVDPLLCFFYSSGTTSMKPKLIPYFDSTLSRAASFVGHQGSMAVLQRLFPPRPNINKILWFLYADKITTTTKSGIKVMAASSYPLQSGKVTSQQLAMFSSPLEVILGSNVEHQMYCHILCGLRNLDIIDGINAPYAIGLVKVFSFLESKWDQLCDDLDSGFPSHEISDMEMREGVIKTIGGPQHELSNRIRLVCEGKNWGGIVRRLFPNVRFIKCVTTGSMKQYYQKLKFYVGEDVPILGGDYFASECCVGLNLDITQPPETTRFVILPTFAYFEFLPFQMNENEKDVVEQTVDLTGVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFHNSSPKVEFVMRAPKSSAEILTEKDLFSAVENFQLALRSAMGIDSIEIVEFASFLDRESTPKQLKVFIEVEVKEESKFLEERVKLFKSCISSLESGLGALYKVQRDKGHLGNLMIIILRHGAFDQLSDLAIKNGTSASQYKPPKIIRNHKVVNFLEKLAVFTVSMDD 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03532 581 Pfam GH3 auxin-responsive promoter 10 563 IPR004993 -
Tsu07g03532 581 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 578 IPR004993 -
Tsu07g03532 581 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 578 - -
Tsu07g03532 581 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03532 Tsu-Chr7 41485954 41488230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03532 8 576 EF-hand Containing Proteins AT1G23160 32.192 1.54e-95 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03532 K14487 - gmx:100786829 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03532 07 41485954 41488230 Tsu07g03532 07 41485954 41488230 ECH