Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03519 ATGGCTTCTTCAGATGCAGCAACAGCAACCAAGAAAGGTGGAAGAGGCATTACAAAAACCAAATCCGTTTCAAGATCAAGCAAAGCTGGTCTTCAATTCCCCGTTGGTCGCATTGCTCGATTCCTCAAAGCCGGTCGCTATGCTCAGCGTGTTGGATCTGGTTCACCAGTTTACCTCTCTGCTGTTCTTGAATATCTTGCTGCAGAGGTTTTGGAACTTGCTGGAAACGCTGCGAGGGATAACAAGAAGACGAGGATTGTGCCGAGGCATATTCAACTTGCCGTTAGGAATGATGAAGAATTGAGCAAGTTGATGGGTTCTGTTACCATTGCTAATGGTGGTGTTTTGCCTAACATTCATCAGAATTTGTTGCCTAAGAAAGTTGGTGGAAAAGGGAAAGGGGAAATTGGATCTGTTAGTCaggagttttag 432 0.4398 MASSDAATATKKGGRGITKTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVGGKGKGEIGSVSQEF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03519 143 Pfam C-terminus of histone H2A 99 133 IPR032454 -
Tsu07g03519 143 Gene3D Histone, subunit A 7 134 IPR009072 GO:0046982
Tsu07g03519 143 MobiDBLite consensus disorder prediction 1 25 - -
Tsu07g03519 143 Pfam Core histone H2A/H2B/H3/H4 18 96 IPR007125 GO:0003677
Tsu07g03519 143 PANTHER HISTONE H2AXA-RELATED 8 141 - -
Tsu07g03519 143 PRINTS Histone H2A signature 21 43 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 PRINTS Histone H2A signature 50 65 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 PRINTS Histone H2A signature 65 78 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 PRINTS Histone H2A signature 79 93 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 PRINTS Histone H2A signature 107 125 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 SMART h2a4 10 130 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 CDD H2A 12 125 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 PANTHER HISTONE H2A 8 141 IPR002119 GO:0000786|GO:0003677|GO:0030527
Tsu07g03519 143 ProSitePatterns Histone H2A signature. 29 35 IPR032458 -
Tsu07g03519 143 SUPERFAMILY Histone-fold 24 127 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03519 Tsu-Chr7 41363704 41364412 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03519 K11251 - gmx:100787899 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03519 07 41363704 41364412 Tsu07g03519 07 41363704 41364412 ECH