Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03503 ATGGCAACGAAACAAGGAGTAAAATCAAAACGATTTGGATCGATTGGTGTAACGAAAGGTGTGAATTCGCCTTCGTCTTCAACAACATCGTCTTCTAAACAGTTTCATGAAACTTCCAATGATGCTCAGAGCTCGCCGGCGTCTTCGTCAGTGAGAAGTAAGCCGCAGCTTTTTCATCCGGAAGTTGTGCCTGTggaagttaaaaaaattaaagaaaatgttaCTGTGACAGTCCGGTTTCGGCCTTTGAATCCAAGGGAAATTCGTCATGGCGAGGAGATTGCTTGGTATGCAGATGGAGATACTGTAGTGCGAAATGAGTATAATCCGTCCATAGCGTTTGCTTACGATCGTGTCTTTGGTCCCACGACCACAACTCGTCATGTCTATGATGTTGCCGCTCAGCATGTTGTCAGTGGTGCTATGGAGGGCGTCAACGGTACAGTATTTGCATATGGAGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCTCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCGTACTTGGAAATCTACAACGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTTTGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTCTCTCTTATTGCAGCTGGAGAAGAGCACAGACATGTTGGGTCCACAAACCTCAACTTACTCAGCAGCAGGAGTCATACAATATTTACCCTGACCATAGAAAGCAGCCCATGTGGTGAATATATTGAAGGAGAAGCGGTAACACTGTCACAATTGAACCTCATCGATCTAGCAGGTTCAGAGAGTTCAAAAGCTGAAACAATTGGCATGAGAAGGAGAGAAGGATCTTATATCAACAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACCGAAGCTAAAGCTAGTCACATACCATATAGGGACTCCAAATTGACTAGAGTGCTTCAGTCTTCTCTCAGTGGTCATGGACGTGTATCTCTCATTTGCACAGTAACCCCTTCATCAAGTAGTAGTGAAGAGACACATAATACATTGAAGTTTGCTCACCGAGCAAAGCACATTGAAATACAAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGGGGCATTGTCACAGTTCAGCCAAAAGACACTGGGGATGATGACATTGTGCTTCTAAAACAAAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAAGAAGACGCTAAAGCTGCTTTGTTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCCACAAAAGCATCACAGTCAACGAGATTTCCTAACAGGCATGGTCCTCGTAGAAGACATTCCTTTGGAGAAGAAGAGCTGGCATATCTTCCATACAAAAGGCGGGATTTAATCTTAGAAGAGGAAAATATTGACTTGTATGTTAATCTGGAGGGAAATGCGGCATCAGCTGATGATTCTCCAAAAGAGgagaaaaagacaaagaaacatGGACTACTAAATTGGTTGAAATTACGTAAACGGGAAAGTGCCTTAACAGGCACCAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCGTCTACACCTCAAGCAGACAATGGTAACCATGTGGAGTCCAGACTTTCCCATTCTCTGGCCGCAGAAAGCTCTCCATCTGCCGATCATATATCCGAGGGAAGAGAGGATAAAGATATTCATGAGGATAGTTTATTGGGACAAGAGACACCTTTGACAAGTATCAAATCAGTTGATCAAATTGATCTTCTGCGGGAGCAGCACAAAATTTTATTGGGAGAAGTAGCTCTTCATTCCAGTGCACTAAAGAGGCTGTCTGaggaaacaagaaaaaatcCTCAAAATAGTCAGATTCATGTGGAGATGAAAAAGTTGAAAGATGAAATTAAGGAAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATGTCTAATTATTTTGTAGCTTCAGAGCAGACAGATCAATCAGGAGTATCACAGGCTGTTGCTGAGCTGATGGaacaattaaatgataaatccTTTGAACTTGAGGTCAAAGCAGCAGACAACCGTGTAATTCAAGAACAGCTTAATCAGAAGATCTGTGAATGCAAAAGCCTGCAAGAAACAGTTGCCTCTTTGAAACAGCAACTGGAAGATGCAATAGAGTTGAGGAATTTCAGCCCTGCAGCCAATCATTCACAAGGTTTCCCTGGAACCAAGGACTCTCATGGTGAACTCCACCTTGACAAAGGAAACATGAACAGTACCAATGAAGGGATTCTTTTGCAAGCACAGGTATACTTTTTCACCTATTGCCATCCTAATCAGGTGCTCTTTAATACTTAA 2517 0.4084 MATKQGVKSKRFGSIGVTKGVNSPSSSTTSSSKQFHETSNDAQSSPASSSVRSKPQLFHPEVVPVEVKKIKENVTVTVRFRPLNPREIRHGEEIAWYADGDTVVRNEYNPSIAFAYDRVFGPTTTTRHVYDVAAQHVVSGAMEGVNGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNLNLLSSRSHTIFTLTIESSPCGEYIEGEAVTLSQLNLIDLAGSESSKAETIGMRRREGSYINKSLLTLGTVISKLTEAKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSSEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTGDDDIVLLKQKLEDGQVKLQSRLEQEEDAKAALLGRIQRLTKLILVSTKASQSTRFPNRHGPRRRHSFGEEELAYLPYKRRDLILEEENIDLYVNLEGNAASADDSPKEEKKTKKHGLLNWLKLRKRESALTGTSDKSSGAKSTSTPSTPQADNGNHVESRLSHSLAAESSPSADHISEGREDKDIHEDSLLGQETPLTSIKSVDQIDLLREQHKILLGEVALHSSALKRLSEETRKNPQNSQIHVEMKKLKDEIKEKSEQIDLLEKQMSNYFVASEQTDQSGVSQAVAELMEQLNDKSFELEVKAADNRVIQEQLNQKICECKSLQETVASLKQQLEDAIELRNFSPAANHSQGFPGTKDSHGELHLDKGNMNSTNEGILLQAQVYFFTYCHPNQVLFNT 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03503 838 CDD KISc_CENP_E 73 392 - -
Tsu07g03503 838 SMART kinesin_4 71 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 Pfam Kinesin motor domain 79 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 MobiDBLite consensus disorder prediction 16 55 - -
Tsu07g03503 838 PRINTS Kinesin heavy chain signature 144 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 427 IPR027417 -
Tsu07g03503 838 MobiDBLite consensus disorder prediction 1 55 - -
Tsu07g03503 838 ProSiteProfiles Kinesin motor domain profile. 73 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g03503 838 MobiDBLite consensus disorder prediction 570 609 - -
Tsu07g03503 838 Coils Coil 678 705 - -
Tsu07g03503 838 MobiDBLite consensus disorder prediction 567 621 - -
Tsu07g03503 838 Gene3D Kinesin motor domain 64 423 IPR036961 -
Tsu07g03503 838 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu07g03503 838 PANTHER KINESIN-RELATED 21 823 IPR027640 GO:0003777|GO:0007018
Tsu07g03503 838 PANTHER KINESIN-LIKE PROTEIN KIN-7L, CHLOROPLASTIC 21 823 - -
Tsu07g03503 838 Coils Coil 394 428 - -
Tsu07g03503 838 Coils Coil 446 480 - -
Tsu07g03503 838 Coils Coil 753 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03503 Tsu-Chr7 41211289 41225001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03503 1 724 Miscellaneous Gene Families AT5G06670 69.904 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03503 K11498 - gmx:100815027 1371.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03503 07 41211289 41225001 Tsu07g03503 07 41211289 41225001 ECH