Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03497 ATGGACGACgaagaagaacaacaaaaacttcCAGATCTAGTAAAAGCACTAATCCACCATTTACTCTCTCAAAATCTTCCCCCAAATTCCCAACCCTTAAACCCTAATTCCTCTCAATTTCAAAACTCTCTCCGTTACGCTCACCGCATTCTCACCAGCCACCTAACTCCTTCCATAACACCTGACGCCGCCGCAATCGCCGAATCAATCAAACGTCGTCTCGCCACCGAAGGTAGATCCTCTGAAGCTCTCTCATTCGCTGATTTATACACCAAATTCGCTTCAAAAGCTACCGATGTTGATAACAAGTGGGCCCTACTTCATCTCTTCAATATCATATCACAAGATCGAAAAACCGCTGTTAATTCTCAATCTCAATCTCACCTTGATGCTTCGGTGCTTCTCCCGAATTTAACATTATccgataataataataataatgttcgGCGCCGAATCGAAAATAAGGGATGGGATGATGGTGTTGTTGTTCTTGGTAGGGATCCTAGGAATCGTCGCGAAGTTGCGTTTCGCGAGTATGTGAAATTGgttaaggaagaaaatgatGTGACTGAGGAAGCTATGGTGACTGATGTGCTTTATGCTTGTCAAGGTGTTGATGGTAAGTATGTGAAATTTGATAATGAGAAtaatgattatgtttttttGGATTCAATTAGGGTTTCTAGGGCTACTACTAGTATGGTTCATAAGCTTTGTGAATTAGGGGTTTTGTTTAAGAAGGTTATTGGGTATATAGAGCAGAGTTTAGGTCGTTCTCCGGTGGAAGATGTGGGAACTATTGGGCAGGCTTTTTGTTCTGCTTTACAGGATGAGTTGAGTGATTATTATAAGTTGTTGGCTGTGCTTGAAGCTCAGTCTTCGAATCCGATTCCTTTGTTGTCGGAAACTGTTAGTTCGGAAAACTATCTTTCGTTGAGGAGATTGGCTAATTGGCTTGCTGAGCCAATGGTGAAGATGAGGTTGATGGCTGATTTGGTTGAGAAGTGTAGGGTTTTGCGAGGTGGTGCAATGGCTGGTGCGATTCATTTGCACGCTAGACATGGGGATCCGATGGTTCATGAGTTTATGAAGAGGTTGCTTCAGCGTGTGTGTTCTCCGCTTTTTGAAATTGTGAGGAGGTGGGTTTTGGAAGGGGAGTTAGAAGATATATTTTCTGAGTTTTTCATTGTTGGGCAGCCTGTGAAAGCTGAATCCCTTTGGAGAGAGGGATATAGGCTCCATGATGCCATGCTTCCTTCTTTTATTTCAGCTTCTCTTGCTCAGAGGATTTTGAGGACTGGAAAGTCCATAAATTTTCTTCGTGTTTGCTGTGAGGACCGTGGTTGGGCTCGTGCCGCGACTGAAGTTGCCACTGATACAGGGGCCACAGCAAGACGTGGTGGTTTTGGTTATGGGGAAACAGATACCCTTGAGTCATTGGTTGATGAAGCTTCAAAAAGAATTGATAAGCATCTGTTGGAGGTAATTTATGAGAGGTATAAGTTCAAAGAACATTGTCTTGCGATTAAGCGGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAATATCTAATGGATATTGTTGGGCCTGAGCTTTCTGAGGCCGCTAACACTATAAGCTCTTTCAAACTTGCGGGATTGCTGGAGACTGCAATTCGGGCGTCAAATGCTCAGTATGATGACCCTGACATTTTGGATAGGCTCAGGGTCAAAATGATGCCACATGAAAGTGGTGATAGGGGCTGGGATGTATTCTCACTAGAATATGATGCAAGGGTTCCACTAGATACTGTGTTCACAGAGTCTGTGATGGCGAAGTATttaagaatttttaattttttatggaagcTTAAAAGAGTAGAACATGCACTTATTGGTGCCTGGAAGACCATGAAGCCAAACTGCATAACTTCTAATTCCTTTAATAGATTGCAAGGTGCAGTAAAGATGCAGTTAGTTTCAGCATTGAGGCGTTGTCAAGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTGCAATACTATATAATGTTTGAAGTTTTGGAGATATCTTGGTCAAACTTTTTAAGTGAGATGGAAGTCGCCAAGGACCTTGACGATCTACTTGCAGCTCATGAGAAATATATGAATTCAATTGTAGAGAAATCTCTTCTTGGAGAACTCTCTCAGTCCCTTTACAAGTCACTAATAGTAATATTTGATCTTATATTACGTTTTCGGAGCCATGCAGATATTTTATATGAAGGTATTCACGAGTTGCAAGCAAGAATCACAGAGTCCTCCCTATCCTCTCGAGATAAGAAGAAAACACGAAAGCAATTGAATGATAAGTCTGCGGAAGAAGGAACCTGGATTGCTGATGGGAGGAAAGCCTTAACACAACGTGCTGGTGAATTTCTCCGTAAAATGGAGCAAGATCTGGATGCAATTTCTAATGAGTATTCATCATTGCAAGAGGAATTCATTTCTCAGCTGCCTGTGCAGCAGCATGTTGATCTAAAGTTTCTCTTTTTCCGTCTTGACTTCAATGAATTTTATAGACGGGTTGTGTCCTAG 2559 0.4052 MDDEEEQQKLPDLVKALIHHLLSQNLPPNSQPLNPNSSQFQNSLRYAHRILTSHLTPSITPDAAAIAESIKRRLATEGRSSEALSFADLYTKFASKATDVDNKWALLHLFNIISQDRKTAVNSQSQSHLDASVLLPNLTLSDNNNNNVRRRIENKGWDDGVVVLGRDPRNRREVAFREYVKLVKEENDVTEEAMVTDVLYACQGVDGKYVKFDNENNDYVFLDSIRVSRATTSMVHKLCELGVLFKKVIGYIEQSLGRSPVEDVGTIGQAFCSALQDELSDYYKLLAVLEAQSSNPIPLLSETVSSENYLSLRRLANWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHARHGDPMVHEFMKRLLQRVCSPLFEIVRRWVLEGELEDIFSEFFIVGQPVKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDRGWARAATEVATDTGATARRGGFGYGETDTLESLVDEASKRIDKHLLEVIYERYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEAANTISSFKLAGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMAKYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSNSFNRLQGAVKMQLVSALRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLSEMEVAKDLDDLLAAHEKYMNSIVEKSLLGELSQSLYKSLIVIFDLILRFRSHADILYEGIHELQARITESSLSSRDKKKTRKQLNDKSAEEGTWIADGRKALTQRAGEFLRKMEQDLDAISNEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRVVS 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03497 852 Coils Coil 801 821 - -
Tsu07g03497 852 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 32 842 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Tsu07g03497 852 Coils Coil 272 292 - -
Tsu07g03497 852 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 32 842 - -
Tsu07g03497 852 Pfam Gamma tubulin complex component C-terminal 504 847 IPR040457 GO:0043015
Tsu07g03497 852 Pfam Gamma tubulin complex component N-terminal 195 498 IPR041470 -
Tsu07g03497 852 Gene3D - 503 846 IPR042241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03497 Tsu-Chr7 41169064 41172642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03497 K16570 - gmx:100784710 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03497 07 41169064 41172642 Tsu07g03497 07 41169064 41172642 ECH