Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03486 ATGGAATCTGCACAAAAAGACTCACTAATTTCTCACTTTAGCCATCCACATCTTTTGGAACACACTAACAGTAACACTAACACATCCTCCAAAACAAACATAAAGTGCTTTGGTTGCAACCTTAGAATCACACATGAAGATGATTACTACATGTGTAAAACTTGTCCTTTCTATCTTCACAATGTTTGTTACAAAACACCTTTAATCACAAACCACTCTTCACATCCAAAACATGATCTTTTCCTCTTTGTTATACCTTCATCACCTGTTACAAAAACCACCTTCAATTGCTTGGCTTGTAAGCAACATGTTATTGGTTTTTGTTATCATTGTTCTGAATGTAACATTTTCTTTCATTCTCTATGTATTACACTTCCTCTTTCACTTTCAATCACACAACATCCTCATAAATTAAAGCTTGAATTTTCTCCACCTTATGATTTCTTTTGTGACTTGTGTAACAATAATAAACCTGGTTATAAAGGGTGGCTTTATAGGTGTAGTATGTGTGAATTTGATATTCATATAGCTTGTGCAGTTAAGAACATTGAACCTCATTTGTTAAGGCAAAAAGAGAgtgattataattataagattATGGATTTGGTGTCAGAGAAAATTGGTGGTGGAATTAGAAATGAGAGTGCAGTTTCTGGATGGAATAAGAAATTGTTTAGTCCATTGAAAAAACATAGCACAAGCAATGGAAAAAGTATGATTGTTGAACTTGAATTGCAAGAAACAGAAAAAATTACAAGTAgtcattctttttcttcagaaatTTTGGAAGGAATAACTCCGCTTCGCGATAAAATGACTCCTCTTTCTGATGATAGAAGTCCATTATCATCAAGTCAACAATTTAGTGACTCATATTTTTCAATAGATTTGAATAAGTCTTATTCAACAAATCATCATGATCATAGAAGTCAGGTACGAAAAGAAGTTAATAGCGATTATATTAGCCGAAATGTTGTGTCAAGCAATTCAAGGCAAGGTGAAGAAGAATCAATTGGTGTAGTTGATTATTGGCTAAAGAATCATTCACACAAAGATAAGGTGAATGCAGCATTTTCCAAAGGAGGTAGTGATTTTGAAGAATCGAGTCAGAAAGTTGTAGTGAAAAATCCTAAAGAAAGATTGGCCAAGTGGCCTATTAAAGATCAAACAGCCAGAAGAGTAGAGTCAGAAAGAAACAACCATTCAGGTTGGAGGAAGTTGCTAAATTGTTGCCTTTAG 1239 0.3293 MESAQKDSLISHFSHPHLLEHTNSNTNTSSKTNIKCFGCNLRITHEDDYYMCKTCPFYLHNVCYKTPLITNHSSHPKHDLFLFVIPSSPVTKTTFNCLACKQHVIGFCYHCSECNIFFHSLCITLPLSLSITQHPHKLKLEFSPPYDFFCDLCNNNKPGYKGWLYRCSMCEFDIHIACAVKNIEPHLLRQKESDYNYKIMDLVSEKIGGGIRNESAVSGWNKKLFSPLKKHSTSNGKSMIVELELQETEKITSSHSFSSEILEGITPLRDKMTPLSDDRSPLSSSQQFSDSYFSIDLNKSYSTNHHDHRSQVRKEVNSDYISRNVVSSNSRQGEEESIGVVDYWLKNHSHKDKVNAAFSKGGSDFEESSQKVVVKNPKERLAKWPIKDQTARRVESERNNHSGWRKLLNCCL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03486 412 SUPERFAMILY Cysteine-rich domain 46 136 IPR046349 -
Tsu07g03486 412 SMART PHD_3 35 73 IPR001965 -
Tsu07g03486 412 SMART PHD_3 96 154 IPR001965 -
Tsu07g03486 412 Pfam C1 domain 74 123 IPR004146 -
Tsu07g03486 412 Pfam C1 domain 134 179 IPR004146 -
Tsu07g03486 412 PANTHER - 10 310 - -
Tsu07g03486 412 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 10 310 - -
Tsu07g03486 412 SUPERFAMILY Cysteine-rich domain 133 181 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03486 Tsu-Chr7 41088360 41089716 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03486 - - gmx:102661734 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03486 07 41088360 41089716 Tsu07g03486 07 41088360 41089716 ECH