Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03478 atgatgGTCAAAGGTATCCAACTTCAGTTATGCGGCTTTGTTACCCAACGCTGGAATCTAAAACCAATTACCTCTCTTTCATTCTCATCACTTTCCCCAATCTCATACCCTAACCCTAATCCTAACCCTTCTCTCAAACTCCTTCCTACTCCTCGCACCACTCGATTCGCACCGTTTCGCGCTTCCTCATCGCTTCAATCATCTGGGAATGTTCGAAGTATCAAATTCTGTCAATGGTGTGGTGGTTCCACTAAACATGATATACCTGATGGAGAAGAAAAGTTGAGAGCTATATGTACTCTTTGTGGGAGAATTGCCTATCAGAATCCCAAAATGGTAGTTGGTTGCCTCATTGAACATGATAATAAGGTCCTCCTTTGCAAGAGGAATATCCAACCATCTCACGGTCTTTGGACGCTTCCCGCTGGTTATTTGGAAATTGGAGAGTCAGCTCTGGAAGGTGCTGTAAGGGAAACGATGGAGGAAGCAAATGCAGATGTAGAAATAATTTCTCCCTTTGCTCAATTGGACATTCCTTTAATTGGACAAACTTACATGATATTCTTAGCAAAGCTGAAGAAGCCCCATTTTTCACCCGGTCCAGAATCATCAGAATGTCAACTTTTTTCACTTGATGATATACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTGAGTTTGTATGTTGAGGATATCAAGGCCGGCAAGCCCAAATTTCATTATGGAACCattaaaaaaagGCCTGGTACAAGTCCTTCTGATATTCGTGCCTACACACTGGATCATCACATGCACACATGA 810 0.4148 MMVKGIQLQLCGFVTQRWNLKPITSLSFSSLSPISYPNPNPNPSLKLLPTPRTTRFAPFRASSSLQSSGNVRSIKFCQWCGGSTKHDIPDGEEKLRAICTLCGRIAYQNPKMVVGCLIEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESALEGAVRETMEEANADVEIISPFAQLDIPLIGQTYMIFLAKLKKPHFSPGPESSECQLFSLDDIPFNSLSFSSMVVTLSLYVEDIKAGKPKFHYGTIKKRPGTSPSDIRAYTLDHHMHT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03478 269 PANTHER NUDIX HYDROLASE 23 63 268 - -
Tsu07g03478 269 Pfam Nudix N-terminal 75 108 IPR029401 -
Tsu07g03478 269 Pfam NUDIX domain 113 214 IPR000086 -
Tsu07g03478 269 ProSiteProfiles Nudix hydrolase domain profile. 109 232 IPR000086 -
Tsu07g03478 269 Gene3D - 73 108 - -
Tsu07g03478 269 ProSitePatterns Nudix box signature. 143 164 IPR020084 GO:0016787
Tsu07g03478 269 SUPERFAMILY Nudix 75 233 IPR015797 -
Tsu07g03478 269 PANTHER BNAA03G19740D PROTEIN 63 268 - -
Tsu07g03478 269 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 109 260 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03478 K18453 - gmx:100808417 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03478 07 41000059 41004183 Tsu07g03478 07 41000059 41004183 ECH