Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03408 ATGGGCAAGTCAATTCATGATGAGCAGGGAGGTGTTAATGAATCACAAACTGCACCAGTGGGTGCTGTAGATGACGATACACCAGATTCTTTCCTGATAGCCTATTCAACAGGTCAAATGGCACCAAGATGGAAAGGAAAAGATGCAAAATCAAAAAAGGATGCAGAAGCTGAGGCACTTAGAGAACCCATGTCAACGATTATATCACAACTTCAGTCTTCTTTAGTTCAATCAAATACTTGTGGATCTCTCTCTGATAATTGTGTACACTTAGCAGTGCAAGCAGAACAACTTGACCTGCTTGATAAAGCATGCTTTGGTCGACCTGTGAGAACAGTTGAAAAGGACATGTACTGGTTTCAATTAACCTTGGAGGAAGCATTCTACCTATGTTATTTCTTGAAATGCCTCAAGATTAATGGTGGTGCTGATACTGGTCCCTCAAATGATGAACAACTGTGGCATTACTTCAAGTCCAAGAAAGAAGCATTCCCTTGTTTCTACAAGGCTTATTCTCACCTTCGTATGAAAAATTGGGTAGTGAGGTCAGGGGCTCAGTATGGTGTAGACTTTATTGTCTATCGCCATCATCCGGCTCGGGTGCATTCTGAGTACGGTGTACTTATTTTATCACATGACAGTGATGATGATCTAAATGGAAGATTAAGAGTATGGTCTGATGTTCATTGCTCAACTCGACTTCTAGGAAGTGTTGCAAAAACCTTATTAGTTTTATACATTAATAAAAATGGTCACAGTGATGAGTCTCCATTATGTTTGGCAAACTATACCATTGAAGAACGTACAATCTCCAGATGGAGTCCAGAACAATGCCGTGAAAGATCCATATAG 852 0.4026 MGKSIHDEQGGVNESQTAPVGAVDDDTPDSFLIAYSTGQMAPRWKGKDAKSKKDAEAEALREPMSTIISQLQSSLVQSNTCGSLSDNCVHLAVQAEQLDLLDKACFGRPVRTVEKDMYWFQLTLEEAFYLCYFLKCLKINGGADTGPSNDEQLWHYFKSKKEAFPCFYKAYSHLRMKNWVVRSGAQYGVDFIVYRHHPARVHSEYGVLILSHDSDDDLNGRLRVWSDVHCSTRLLGSVAKTLLVLYINKNGHSDESPLCLANYTIEERTISRWSPEQCRERSI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03408 283 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE 40 282 - -
Tsu07g03408 283 Pfam tRNA intron endonuclease, catalytic C-terminal domain 168 251 IPR006677 GO:0000213|GO:0006388
Tsu07g03408 283 MobiDBLite consensus disorder prediction 1 25 - -
Tsu07g03408 283 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 40 282 IPR006676 GO:0000213|GO:0006388
Tsu07g03408 283 Gene3D - 163 256 IPR011856 GO:0003676
Tsu07g03408 283 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 164 252 IPR036167 GO:0006388
Tsu07g03408 283 Pfam tRNA intron endonuclease, N-terminal domain 82 141 IPR006678 GO:0000213|GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03408 Tsu-Chr7 40491818 40496173 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03408 K15322 - gmx:100810335 392.119