Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03403 ATGAAAGTTAATGAAGTGGTTGATAATCGTTCCATTGATTTGGAGAAAGAGCAAAAAGAAGGGATTGAATACATATCAGATACCGACACAACAAAGGATTCAGTATCATCTCAAGGTGATTCTTTCACAAATGAAGATGAGAAAGTGGAGAAAGCTACGAAAGATCCAAAAAGTAAGGTTAGAGTGAAGTCTTTAGAAAACAATCGTGGATCAAAGGAGAGATCTGATAGGAAAGCAAATAAACTGCAATCAAAGGTATCAGGTAGCAATCAAAAGAAACctataaactcaaataaaacgCCTTCGAAAGTTACAAACAAAAATACGTCAACCAATTCCAAGACTGTGAAAGTTCCTGTTAAAGTTTCGTCGGAGTCTTCTGAAGGAATTGAAGTTGATGAAAAACCTGTTATAGCGGTCAAGGAAATTGATATCTTGGACGGATCCTCCAATGGTGCTCAGGTCAAGGAAATTGATATCTTGGATGGATGCTCCAATGGTGCTCACAGCGTAGGAAGTGAAGATGAAAGTCGTGAAACCGCTAATGCTGAAGAGAATGTTGACCGTGAAAATGCGGCAGCGGCTTTAGAATTGAAAATTAGAGAAATGGAATCACGAATTGAAAATCTTGAAGAGGAACTGAGAGAAGTTGCTGCTCTTGAAGTCTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCGGCACACAAGGTACACACACCTGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGTAAGCACTGGACCACGAAAGCGAAAGCAACAATAGCCAAGAATACTGTTTCTGGTCTTATTTTGGTTGCTAAATCATGTGGTAACGATGTTTCAAGGTTAACTTTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTTCACAAGCATTTGGGAATGCATGTCAAGTTAGTCCCATTATGAGGTTGGCTGGGTCAAATGCTGCCAAGAGGAATGACGGGAAGTCTGCATCAGTGAAATTGAGAGGTATCACAAATGGTAAATCAGGAAATGGTTTTATGCAGACCGGTGAAGATTGGCAGGAGACAGGAACCTTTGTATTTTCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGCTAGTAGAGTCAGTGTGGTGGCAGGCTTTGACTCCTTATATGCAATCGTCGGTTGAGGACTCGTGTTCAAATAAATCCATTGGCAGGCTGCTAGGACCTGCTCTTGGTGATCACAATCAAGGAAACTTTTCGATCAATCTCTGGCGAAACGCTTTCCAAGATGCTTTTCAACGACTTTGTCCTGTTCGAGCAGGAGGGCACGAGTGTGGTTGTTTGCCTGTGATGGCAAGAATGGTCATGGAACAGTGCATAGATAGACTCGATGTTGCAATGTTCAATGCAATTCTTCGGGAATCAGCTCTTGAGATACCAACTGATCCTGTATCAGATCCGATTGTGGATTCAAAGGTGTTGCCAATCCCAGCAGGAAACTTAAGCTTTGGATCTGGTGCACAGCTAAAAAATTCcGTTGGAAATTGGTCTAGATTGCTCACTGATATGTTTGGCATTGATGCTGAAGATTGTTCGGAAGAATATCAGGAGAACGGTGAGAATGACGAAAGACAGGGTGGAGACCGTGAACCTAAACCGTTTGTTCTCCTTAACGATTTGAGTGACCTTCTAATGCTCCCAAAAGATATGCTTATGGATAAACAAGTCAGACAGGAGGTATGTCCTTCCATCAGTCTTTCATTGATTACACGCGTTCTCTGTAACTTCACTCCGGATGAGTTCTGTCCGGATCCTGTTCCAGGAACCGTCTTGGAGGCCTTGAACGAGGAGACTATTGTGAAGCGAAGATTGGCAGCAGAGTCCATAAGAAGTTTCCCTTATGCCGCGGCTCCAGTTGTGTATACACCTACCTCGTCAGCCAATGTGGCCGAGAAAGTTGCAGAAGCAGGAGGAAAATGTCACCTGACGAGGAATGTATCGGCTGTTCAAAGGAGAGGATATACAAGTGATGAAGAGCTTGAAGAACTTGAATCGCCGCTTACATCTATCATTGATAAGCTTCCTTCATCTCCAACAGTTACTACTACTAATGGAAAGCAAGTGAGTCACACCACTACAAATGCTAGATATCAACTACTTCGTGAAGTTTGGTCTATGTGA 2172 0.4217 MKVNEVVDNRSIDLEKEQKEGIEYISDTDTTKDSVSSQGDSFTNEDEKVEKATKDPKSKVRVKSLENNRGSKERSDRKANKLQSKVSGSNQKKPINSNKTPSKVTNKNTSTNSKTVKVPVKVSSESSEGIEVDEKPVIAVKEIDILDGSSNGAQVKEIDILDGCSNGAHSVGSEDESRETANAEENVDRENAAAALELKIREMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTTKAKATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNACQVSPIMRLAGSNAAKRNDGKSASVKLRGITNGKSGNGFMQTGEDWQETGTFVFSLERVESWIFSRLVESVWWQALTPYMQSSVEDSCSNKSIGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVMARMVMEQCIDRLDVAMFNAILRESALEIPTDPVSDPIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGIDAEDCSEEYQENGENDERQGGDREPKPFVLLNDLSDLLMLPKDMLMDKQVRQEVCPSISLSLITRVLCNFTPDEFCPDPVPGTVLEALNEETIVKRRLAAESIRSFPYAAAPVVYTPTSSANVAEKVAEAGGKCHLTRNVSAVQRRGYTSDEELEELESPLTSIIDKLPSSPTVTTTNGKQVSHTTTNARYQLLREVWSM 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03403 723 Coils Coil 186 220 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 167 186 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 1 122 - -
Tsu07g03403 723 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 8 722 IPR021827 GO:0005643
Tsu07g03403 723 MobiDBLite consensus disorder prediction 82 122 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 1 27 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 172 186 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 530 549 - -
Tsu07g03403 723 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 8 722 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 28 42 - -
Tsu07g03403 723 MobiDBLite consensus disorder prediction 43 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03403 Tsu-Chr7 40456283 40460869 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03403 - - mtr:MTR_7g092460 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03403 07 40456283 40460869 Tsu07g03403 07 40456283 40460869 ECH