Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03392 ATGAGCATCTCATCACTGCGTTTCGATTCTCGCACACTATGTACTCCTCAATCTCAACAACACCcattcaccttccacaacccctATCGTCCCACTAGAAACGTCGTCGTTTGCGCCGCCAAGCCACTTGCATCTACTCCTACTAAACTCACCGCCGCCGATCCTCTCGCCGGTCGAATCGAGTCGCTCAGTCAAGTCTCCGGCGTTCTCGGTTGTCAATGGGGCGATGAAGGAAAAGGAAAGCTTGTTGATATCTTAGCTCAACACTTCGAAATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGGCATACCATTTATAATGCGGAGGGGAAAAAATTTGCCCTTCATCTTGTTCCTTCTGGTATCCTTAATGAGGATACGCTGTGTGTTATTGGTAATGGTGTTGTAGTACACCTGCCGGGGTTGTTTCAAGAGATTGACAACCTTGAGTTGAATGGGGTCTCTTGCAAGGGAAGGATATTGATTTCGGATCGGGCTCACCTCTTGTTCGATTTCCACCAAACAGTGGATGGGCTGAGAGAAGCCGAGCTCTCTAAATCTTTCATTGGCACCACCAAGAGAGGCATTGGACCGTGCTACTCTAGCAAAGCTAACCGTAATGGGATTAGAGTTGGTGATTTGAGGTACATGGAAACTTTACCTCAGAAGCTTGATCTTTTGTTATCAGATGCAGCATCGAGGTTCAAAGACTTTAAGTATGGTCCGGATGTGTTAAGGGAAGAAGTTGAGAAATACAAGAGGTACGCTGAAAGGTTGGAACCCTATATTGCTGATACCGTGCATGTCATGAATGAAGCCATAACACAAAAGAAGAAGATCTTGGTTGAAGGAGGACAGGCAACCATGTTGGACATTGATTTTGGCACTTATCCCTTTGTTACTTCTTCTAGCCCATCAGCTGGTGGGATATGCACCGGTCTTGGTATTGCTCCAAGAGTAGTTGGTGATTTAGTAGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCTGGTCCTTTTCCAACTGAAATTTTGGGTCCAGGAGGTGATCTCCTCAGATTTGCTGGGCAGGAGTTTGGCACGACTACTGGACGCCCCCGACGATGTGGCTGGTTGGATATTGTTGCATTAAGATACGCATGTCAGATCAACGGTTTTTCAGCATTGAATCTCACTAAGCTGGATGTTTTGGATGATCTTGATGAAATACAACTGGGTGTCTCCTATAAACACGAGGATGGCACTCCAGTCAAATCATTCCCATCAGATCTCCGTCTTCTCGAGCAATTGAAGGTGGAATATGAAACGATTCCTGGATGGAAGACTGACATTTCTTCCATTAGAAACTATTCTGACCTTCCAAGAGCTGCACAGTTGTATGTAGAAAGGATAGAAGAGCTTGTTGGTGTCCCTATTCACTACATTGGTGTTGGGCCTGGACGTGATGCCCTCATATTCAAATGA 1467 0.4519 MSISSLRFDSRTLCTPQSQQHPFTFHNPYRPTRNVVVCAAKPLASTPTKLTAADPLAGRIESLSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFQEIDNLELNGVSCKGRILISDRAHLLFDFHQTVDGLREAELSKSFIGTTKRGIGPCYSSKANRNGIRVGDLRYMETLPQKLDLLLSDAASRFKDFKYGPDVLREEVEKYKRYAERLEPYIADTVHVMNEAITQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLVGVVKAYTTRVGSGPFPTEILGPGGDLLRFAGQEFGTTTGRPRRCGWLDIVALRYACQINGFSALNLTKLDVLDDLDEIQLGVSYKHEDGTPVKSFPSDLRLLEQLKVEYETIPGWKTDISSIRNYSDLPRAAQLYVERIEELVGVPIHYIGVGPGRDALIFK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03392 488 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 329 488 IPR042111 -
Tsu07g03392 488 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 69 328 IPR042109 -
Tsu07g03392 488 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 73 80 IPR018220 GO:0005525
Tsu07g03392 488 PANTHER ADENYLOSUCCINATE SYNTHETASE 31 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Tsu07g03392 488 CDD AdSS 65 487 IPR001114 GO:0000166|GO:0004019|GO:0006164
Tsu07g03392 488 Hamap Adenylosuccinate synthetase [purA]. 1 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Tsu07g03392 488 TIGRFAM purA: adenylosuccinate synthase 69 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Tsu07g03392 488 Pfam Adenylosuccinate synthetase 69 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Tsu07g03392 488 ProSitePatterns Adenylosuccinate synthetase active site. 196 207 IPR033128 -
Tsu07g03392 488 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 165 263 IPR042110 -
Tsu07g03392 488 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 31 488 - -
Tsu07g03392 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 486 IPR027417 -
Tsu07g03392 488 SMART adenylsucc_synt 66 487 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03392 K01939 - gmx:100792329 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03392 07 40334047 40337214 Tsu07g03392 07 40334047 40337214 ECH