Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03391 ATGAAGAAGAGTGCATCACCTATCTCTTCAGATCAATGCATATCAATTAACACTCCTCTTCTTGACTTGGAAAAGGAAGCTGAGATATCAAGTGGTGGAGTGTCACAAAATACGGTCATAGAGGATGCCGAGAAAGATGAATATACCATTAATGATAGTCCTATTGAGCAAGTGAGACTAACGGTTCTGACCACCGACGACCCTTCTCAACCGGCGTTAACATTCCGGACCTGGGTTTTAGGGTTAGTATCATGTGTGCTACTTGCATTTGTGAACCAGTTTTTAGGCTACAGAACCAACCCTTTGAAAATCACTTCTGTCTCAGTTCAGATTATTAGCCTCCCACTTGGAAAACTTATGGCTGCAACACTTCCCACAAAACCAATTCAAGTCCCTTTTACAACCTGGTCTTTTTCGTTGAATCCGGGGCCGTTCTCTTTGAAAGAACATGTGTTGATAACCATCTTTGCTAGCTCAGGATCTAGTGGTGTTTATGCAATTAACATCATCACAATTGTTAAGGCTTTCTATCACAGAACCATCCATCCCGTAGCGGCTTATTTGTTAGCCCTATCGACTCAGATGCTAGGGGCAtttcatgaaaaagaaaaaaggccTAAAGGAGGAACTTCTAGGCTGCAATTCTTTTTCATAGTCTTTGTAGCTAGCTTTGCGTATTACATCGTTCCGGGATACCTTTTCCAAGCAATATCAACCGTCTCCTTTGTTTGCTTGATTTGGAAAGATTCCATAACTGCACAACAGATCGGTTCTGGCATGAAAGGCCTTGGTATCGGTTCATTCGGCCTTGACTGGAACACTGTCGCCGGCTTTTTAGGTAGTCCTTTGGCTGTTCCTGGCTTTGCAATCGCCAACCTAATGGCTGgatttgtattatatatgtatgtttttattCCAATTGCCTATTGGAACAATTTATATGATGCTAAAAAGTTCCCCCTCATTAGTTCTCACACATTTGACTCAACCGGTGCAACGTACAATGTTACTCGGATTCTCAATACCAAAACTTTCGACATCAATATGGAGAGTTACAACAATTACAGCAAGATCTATATGAGTGTCACGTTTGCGTTTGAGTACGGATTGTGCTTTGCAGCTCTTACAGCCACTATTTCGCACGTTGTCCTCTTCCACGGAGAAATGATACTTGAATTGTGGAAGAAGACAACGACTTCACTAAAAAACCAACTCGGAGATGTGCATACAAGAATTATGAAGAAAAACTATGAACAAGTCCCTGAATGGTGGTTTGTCACCATTCTGATTTTAATGTTTATCATGGCCTTAGTAGCTTGCGAAGGCTTCGGAAAGCAGCTCCAACTTCCATGGTGGGGAATCCTACTTTCTCTAGCAATTGCATTAGTTTTCACCTTACCAATTGGAGTCATTGAAGCAACAACAAATATAAGATCGGGCCTTAATGTGATCACAGAGTTGGTTATTGGTTACATGTACCCTGGAAAGCCACTTGCTAATGTTGCCTTCAAGACATACGGCCATATCAGCATGGTACAAGCACTAGGTTTTCTTGAAGACCTCAAATTAGGTCACTATATGAAAATTCCACCAAAATCAATGTTCATTGTTCAGCTAGTCGGCACAGTAGTTGCTTCATCTGTTCACTTTGGAACAGCATGGTGGCTTCTTACATCTATCGAGAACATATGCGATGAATCATTGTTGCCGAAAGGTAGTCCTTGGACATGTCCTGGTGACGACGTGTTTTACAACGCTTCCATTATATGGGGAGTAGTAGGTCCAAAGAGAATGTTTACCAACGACGGCGTTTATCCTGAGATGAATTGGTTTTTCCTTATTGGTCTAATTGCACCTGTTCCAGTGTGGCTTCTTTCAATCAAATTTCCTAACCACAAATGGATTAAACTCATTAACATTCCTATTATCATTGCAGGTGCAACTGACATTCCACCAGTGAGATCTGTGAATTATATTACATGGGGAATTGTTGgaatgttctttaatttctatGTTTATAGAAAGTTTAAGACTTGGTGGGCAAGACATACTTATATCCTTTCAGCTGGTTTAGATGCTGGAGTTGCTTTTATGGGCTTAGTCCTTTATTTTGCACTTCAATCCTAG 2127 0.401 MKKSASPISSDQCISINTPLLDLEKEAEISSGGVSQNTVIEDAEKDEYTINDSPIEQVRLTVLTTDDPSQPALTFRTWVLGLVSCVLLAFVNQFLGYRTNPLKITSVSVQIISLPLGKLMAATLPTKPIQVPFTTWSFSLNPGPFSLKEHVLITIFASSGSSGVYAINIITIVKAFYHRTIHPVAAYLLALSTQMLGAFHEKEKRPKGGTSRLQFFFIVFVASFAYYIVPGYLFQAISTVSFVCLIWKDSITAQQIGSGMKGLGIGSFGLDWNTVAGFLGSPLAVPGFAIANLMAGFVLYMYVFIPIAYWNNLYDAKKFPLISSHTFDSTGATYNVTRILNTKTFDINMESYNNYSKIYMSVTFAFEYGLCFAALTATISHVVLFHGEMILELWKKTTTSLKNQLGDVHTRIMKKNYEQVPEWWFVTILILMFIMALVACEGFGKQLQLPWWGILLSLAIALVFTLPIGVIEATTNIRSGLNVITELVIGYMYPGKPLANVAFKTYGHISMVQALGFLEDLKLGHYMKIPPKSMFIVQLVGTVVASSVHFGTAWWLLTSIENICDESLLPKGSPWTCPGDDVFYNASIIWGVVGPKRMFTNDGVYPEMNWFFLIGLIAPVPVWLLSIKFPNHKWIKLINIPIIIAGATDIPPVRSVNYITWGIVGMFFNFYVYRKFKTWWARHTYILSAGLDAGVAFMGLVLYFALQS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03391 708 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 198 708 - -
Tsu07g03391 708 Pfam OPT oligopeptide transporter protein 199 705 IPR004813 GO:0035673
Tsu07g03391 708 Pfam OPT oligopeptide transporter protein 73 199 IPR004813 GO:0035673
Tsu07g03391 708 PANTHER ISP4 LIKE PROTEIN 1 197 IPR004648 GO:0055085
Tsu07g03391 708 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 221 707 IPR004813 GO:0035673
Tsu07g03391 708 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 57 199 IPR004813 GO:0035673
Tsu07g03391 708 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 199 707 IPR004648 GO:0055085
Tsu07g03391 708 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 1 197 - -
Tsu07g03391 708 PANTHER ISP4 LIKE PROTEIN 198 708 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03391 Tsu-Chr7 40330439 40333123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03391 51 708 Organic Solute Cotransporters AT4G26590 64.099 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03391 - - gmx:100820498 1237.25