Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03373 ATGGGAGAAGCACCTGCATTTCTTGTTGAGGATCTTCAGGATGGACCTCTTAATGGTCTTGAATTGAAAAATGGAACTTGCAAAACAACTACTACAGTTGGCGATAAAACGTATGTCACTGTTGGAGCTGGTGATGGAACTTTGTCCATTGACGTTCAAATTTTTGACCGTAGTCTTGGAGAATGGGTTCACCCAACTGTGCTAGGCACTAAACCCTTGTCGTGCAAAGGTCACTCTGCTGTGCTTTGCAAAAACCGGATACTAGTTCTTAAGAAGGGTTCTAAATCAGATGATCAAATATGGTTCCTAGAGGTGGACACCGAATATGTTAGGCAGCAGCGAAAAAAATTGGGGACTGAGGTTGTTGCGTGGAGTAAGGGTGTGATAGGCAATGCTGAGAAACCTATTGTTATTAGTGGTCCTTCTGGAGTTGGTAAAGGAACATTGATATCAATGCTCATGAAGGAATTCccatcaatgtttggtttttCGGTGAGCCATACAACCCGTGCTCCAAGAAATATGGAGAAAGACGGGGTCCATTACCATTTTACCGAGAAGAGTGTGATGGAGAAAGAgattaaaaatggaaaatttcTTGAATTTGCATCTGTCCATGGTAATTTGTACGGGACCAGTGTTGAAGCTGTTGAAGTCGTAGCAGATGCAGGAAAACGCTGTATTCTTGATATTGATGTTCAAGGAGCAAAATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTGTCTGTCCACCATCAATGGAAGAGCTTGAGAAGCGCCTTCGTGACAGAGGGACTGAGACAGAAGAACAGATCCTGAAGCGACTGCGTAATGCCAAAGCTGAGATTGAGCAGGGGACGTCTTCTAACATATTTGATTTCATGttatataatgacaaacttgaGGAGTCTTATGAGAAACTTAAGAAATTATTGGGGCTCGATGGTTTTGTCGCTGCTTCACCCAAATCAGCACCTAGAGAGATTAATCTACCAGTCGATCATTCAGTGTCTAAAATTGATGACAAAATCATCATATCTTCGGGACTAGAGAAGGAGCCAAAGAATTTGATCATGTTGGATGTTTCCTCACTAAAAGGCGGTGCACCTGGAAGGACAAGAGGACTTGATTTTCAAGTCATAGGGGCCTCTTTGGATCTGCATTGCTAA 1176 0.4116 MGEAPAFLVEDLQDGPLNGLELKNGTCKTTTTVGDKTYVTVGAGDGTLSIDVQIFDRSLGEWVHPTVLGTKPLSCKGHSAVLCKNRILVLKKGSKSDDQIWFLEVDTEYVRQQRKKLGTEVVAWSKGVIGNAEKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRNMEKDGVHYHFTEKSVMEKEIKNGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGAKSVRASSLEAIFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAKAEIEQGTSSNIFDFMLYNDKLEESYEKLKKLLGLDGFVAASPKSAPREINLPVDHSVSKIDDKIIISSGLEKEPKNLIMLDVSSLKGGAPGRTRGLDFQVIGASLDLHC 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03373 391 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 340 - -
Tsu07g03373 391 PANTHER GUANYLATE KINASE-RELATED 1 340 - -
Tsu07g03373 391 Pfam Guanylate kinase 133 314 IPR008145 -
Tsu07g03373 391 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Tsu07g03373 391 SMART gk_7 132 318 IPR008145 -
Tsu07g03373 391 Gene3D - 129 317 IPR027417 -
Tsu07g03373 391 SUPERFAMILY Galactose oxidase, central domain 25 110 IPR011043 -
Tsu07g03373 391 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Tsu07g03373 391 Gene3D - 23 126 IPR015915 GO:0005515
Tsu07g03373 391 Hamap Guanylate kinase [gmk]. 131 318 IPR017665 GO:0004385|GO:0006163
Tsu07g03373 391 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Tsu07g03373 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Tsu07g03373 391 CDD GMPK 135 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03373 Tsu-Chr7 40162118 40166395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03373 K00942 - gmx:100808931 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03373 07 40162118 40166395 Tsu07g03373 07 40162118 40166395 ECH