Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03351 ATGGTTTTCAAACACACTCCACCATACACCATACACCATACTTGTCCTCTATGCACTGTAGAACTAGAAGTAAAAGCAACCTATGATCTACTCAAAATCAAAGTCCAATACAAGGAGCCGCCATGCAGAGTCAGTCAACACAACAAGTTAACGATACTTGGGAAGCTTGCATCATATGCTTATGAAGAAGCTTCTCGAGCTTATGGTGCCTATGAAGATTTACAAGGGATAAAAAACACTCTCTCAATTGTCAGAGGTGTACTATTGGATGCTGAGGAGAAAAAGGACCAAAAACAAGGGCTGCATGAATGGCTGAAGCAGATTCATAACATATGCTATGATGCTGAAGACATATTGGATGAATTTGAGTTTCAAGACAATAGAAAGCAAGCTGTGGAAGCTTCTGGCAGCACTCGGACGAAGGTACGCCACTTCTTTTCTCCCTTTAATCCACTTGTTTTCCGATTTAAGATGGCACATCAAATCAAAGAGATCAGGGATAGATTGAATAAGGTAGCAGCCGATGGAACTGGGTTTGGACTTGTGAGAATGGATGTTGAACCCAGACTTGCTGTGCAAAGGAGAGAGTTGACCCATTCCCATGTTGATGCTTCAAATGTAATTGGGAGGGAGAATGACAAGGAAGCAATTATCAAGCTTTTGATGGAATCTAATCCTCGTGCTGATGGTGATAAAAGTTTGTCCGTCATTCCCATTGTGGGAATCGGAGGACTAGGAAAGACCACACTTGCAAAGATGGTATTCAATGATAAGAGGATAGATGATATTTTCCAATTGAAGATTTGGGTGTGTGTCTCcgatgattttgattttaggcaaataattatcaaaattatCAACTCTTCACCTCCACCTGGGGTTGCTATTCCTAACCAAGAAGATATCAACCACTTTGATATTGAGCAACTGCAGATTCGTCTAAGACATAAACTTGATGGTCAAAAGTATATCCTCGTGCTAGATGATATATGGAATGATGATCGCGCGAAATGGATTGATTTGTTAGATCTGATCAAAGTTGGTGCAGAAGAAAGTAAAATCATAGTGACGACGCGTAGCAACTCAATCGCTTCCATGATGGGTACCGTTCCTTCATATGTTCTGGAAGGTCTTTCACAAGAGAATTGTTTGTCTCTGTTTGTGAAATGGGCATTCAaggatggagaagaagaaaattattcAAATCTAGTTGAGATCGGaaaagaaattgtaaaaaaatgtgcAGGAGTTCCCTTAGCCATCAAAACATTAGGAAGTTCACTGTtcttaaaatttgatttaaataagtGGATATTCATAAGAGACCGTGAAATATGGAATTTAGAACAgaagaaagatgatattttacCTGCATTAAAACTAAGCTATGATGAAATGCCATCCTATTTGAGGCAATGCTTTGCTTATTTTTCCTTGCATCCCAAAAATCATGTCTTTTCTGCCATGGAAACTACTACTCTGTGGATAGCCCTTGGATTAGTTAAATCCACGAATGGAAGTGAGAAGCTGGAGGATATTGCTAGAGAATATATACATGAGTTACATTCAAGATCATTGCTTCAGGATTTTTATGACATTGGGATAGATTGTAATTTCAAAATGCATGATTTGATACATGATCTAGCATTGTATGTTGCAAATGAGGAGTTTGTAATGGTAGACTCAAATACTCGGAATATATCAGAACAAGCACGGCATTTATCAATTATTGAAAATGATTCACTTGATCGTGTTTTGTTCCCCAAGTCCAAAAGTGTAAGAACTATTATGTTTCCCATTAAAGGAGTGGGCCTTGACAATGAAACATTGTTACATACATGGATTTCCAGATATAAATACTTGCGATATTTATATTTGGATTGTTCTTCATTTGAGACTCTTCCTAACTCAATTGTTGAATTGAAACACCTGCGTGTTCTTAGTCTTTCTGacaacaataaaatcaaaagaCTTCCTCATTCTATTTTCAAACTCCATAATTTGCAACTCTTGGCAGTAAATAGATGCAGAGAGCTTGAAACATTGCCAAAAGAATTAGGGAAGATGATTGGCCTTCGACATTTGTACATAACAACCAAACAATCAGTTTTATCATTGACTGAATTTGCAAACTTGAACCATCTTCAGTATTTGGCATTTGAATCTTGTAAAAATATGAAGTTTGTATTCAGTGGGGCAGAACAGCTCGCTTCCATTGAAACATTGTATCTGGTTTCATGTGGGAGTATAGAATCCTTACCTCTCTATATTTTTCCGAAATTACAGGCTCTATTAATTACAGACTGCCAAAAGTTAAACTTGTCATTGAACAACGAAAGGCCAGTCCGAAAATTAATGATGAAATTTTTGTGTATTCAAGATATTCCAGGGCTTTTGACATTGCCTGGATGGATTGAAGGTGTTGTAGAAACTTTAGAGATCTTGGTAATTTCTGAACTTCCCAATTTTCATATGCTTCCTGAATGTCTGACAACAATGACTCATGTTAAAAAGCTCTTCATTTTTGGTTGTCCTCAACTATTGAGCCTTCCAAGTGGCATGCATCACCTCACCTCCCTTGAAGAATTGCGCATACGAGTCTTCTCATTGAAGAGGAGGAGGATTAAAGACATTGACCTTAAAGGTATGATGAAGCTGGAGTGGAAAAAGGATAAGCAAATTTGA 2685 0.3624 MVFKHTPPYTIHHTCPLCTVELEVKATYDLLKIKVQYKEPPCRVSQHNKLTILGKLASYAYEEASRAYGAYEDLQGIKNTLSIVRGVLLDAEEKKDQKQGLHEWLKQIHNICYDAEDILDEFEFQDNRKQAVEASGSTRTKVRHFFSPFNPLVFRFKMAHQIKEIRDRLNKVAADGTGFGLVRMDVEPRLAVQRRELTHSHVDASNVIGRENDKEAIIKLLMESNPRADGDKSLSVIPIVGIGGLGKTTLAKMVFNDKRIDDIFQLKIWVCVSDDFDFRQIIIKIINSSPPPGVAIPNQEDINHFDIEQLQIRLRHKLDGQKYILVLDDIWNDDRAKWIDLLDLIKVGAEESKIIVTTRSNSIASMMGTVPSYVLEGLSQENCLSLFVKWAFKDGEEENYSNLVEIGKEIVKKCAGVPLAIKTLGSSLFLKFDLNKWIFIRDREIWNLEQKKDDILPALKLSYDEMPSYLRQCFAYFSLHPKNHVFSAMETTTLWIALGLVKSTNGSEKLEDIAREYIHELHSRSLLQDFYDIGIDCNFKMHDLIHDLALYVANEEFVMVDSNTRNISEQARHLSIIENDSLDRVLFPKSKSVRTIMFPIKGVGLDNETLLHTWISRYKYLRYLYLDCSSFETLPNSIVELKHLRVLSLSDNNKIKRLPHSIFKLHNLQLLAVNRCRELETLPKELGKMIGLRHLYITTKQSVLSLTEFANLNHLQYLAFESCKNMKFVFSGAEQLASIETLYLVSCGSIESLPLYIFPKLQALLITDCQKLNLSLNNERPVRKLMMKFLCIQDIPGLLTLPGWIEGVVETLEILVISELPNFHMLPECLTTMTHVKKLFIFGCPQLLSLPSGMHHLTSLEELRIRVFSLKRRRIKDIDLKGMMKLEWKKDKQI 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03351 894 Gene3D - 191 372 IPR027417 -
Tsu07g03351 894 Pfam Rx N-terminal domain 52 137 IPR041118 -
Tsu07g03351 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 476 IPR027417 -
Tsu07g03351 894 Gene3D - 462 551 IPR036388 -
Tsu07g03351 894 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 53 776 - -
Tsu07g03351 894 Gene3D - 50 163 - -
Tsu07g03351 894 Pfam NB-ARC domain 210 464 IPR002182 GO:0043531
Tsu07g03351 894 Gene3D Ribonuclease Inhibitor 565 889 IPR032675 -
Tsu07g03351 894 Gene3D - 377 461 IPR042197 -
Tsu07g03351 894 PRINTS Disease resistance protein signature 236 251 - -
Tsu07g03351 894 PRINTS Disease resistance protein signature 414 428 - -
Tsu07g03351 894 PRINTS Disease resistance protein signature 317 331 - -
Tsu07g03351 894 PRINTS Disease resistance protein signature 639 655 - -
Tsu07g03351 894 Pfam Leucine rich repeat 620 676 IPR001611 GO:0005515
Tsu07g03351 894 SUPERFAMILY L domain-like 540 870 - -
Tsu07g03351 894 CDD RX-CC_like 53 173 IPR038005 -
Tsu07g03351 894 PANTHER DISEASE RESISTANCE PROTEIN RP 53 776 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03351 Tsu-Chr7 39975855 39980681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03351 610 724 Receptor kinase-like Gene Family AT3G11080 31.624 1.38e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03351 - - mtr:MTR_7g091550 1209.13