Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03337 atggcGGCATTGAAAGGATTATTGAAGAAAAGTTTAGGAGAAATGGATTTCAACGCCGGTGGAGGACTCATCAACTGGTTTCCAGGACACATGGCAGCCGCCACACGCGCCATCCGTAACCGTCTTAAACTCGCTGACCTCGTTATCGAAGTCAGAGACGCTCGTATCCCTATTTCTTCCATCAATTCCGATCTTCAGTCTCATCTTTCATCAAAACGACGTGTCATTGCACTCAACAAAAAAGACTTAGCTAACCCTAACATCATGCATAAATGGGTGAATTATTTTGAGACGTGTAAGCAAGATTGTATTCCTATAAATGCTCATAGTAAGAGTTCTGTTACGAAGCTTCTAGAACTTGTGGAGTTTAAGTTGAAGGAAGTGATTTTGAAGGAACCTACTTTACTTGTTATGGTGGTTGGTGTTCCTAATGTTGGAAAATCTTGTTTGATTAATTCTATTCATCAAATTGCGCAATCTCGTtttcctgTGCAGGAGAAGATGAAGCGAGCTACTGTGGGTCCACTACCCGGTGTTACTCAAGATATTGCAGGATTTAAGATAGCGAACAAACCGAGCATATACGTCCTAGATACCCCAGGAGTTCTTGTTCCAAGTATTTCAGACATAGAGACGGGGTTAAAGCTTGCTCTTGCAGGGTCTGTTAAAGATTCAGTGGTGGGTGAGGAGCGTATTGCTCAATACTTATTGGCGGTTTTAGATACCCGGGGTACTCCACTTCACTGGAAACACCTACTAAATAACAGGAGAATAGATGGGATTGCGTATGATGAAGAAAATAAGCGATATAACTTGAAAAATCTTAAGCAAAGGAGAAGTCCGCCTAATAGATCTGACTTGGTATACGTGGAGGATATTGTGGTGGGAGTTCAGCATGCTCTCTATTCAACTCTAGCAGAATTCAATGGCAACGTAGAAGATGAGGGCGACTTGGAGAACCTGATTGACGAGCAGTTTGGTGCACTGCAGAAGGCATTGAAGATACCTCACAAGGCTTCCGAAGCACGGTTGATGGTATCCAAAAAGTTCCTTACTTTATTCAGAGCTGgaACACATGCTGCAAATGTTGCAGAGGCTGGCAACATTCAAATCAACGGGAAAAGGAGAAATTTGTACTCCAAAGAAGTGTCTTATGTGTGTCAAGAGGAACTATTCTTAGGAACATTGACTGTAAAAGAAACCCTCACATACTCAGCAAACATGAGGCTTCCTTCTAAATTGACAAAGCAAGAGATTGACAAAATTGTGGAAGACACAATAATAGAAATGGGACTTGAAGATTGTGCTAATAGCAAAATTGGGAATTGGCATTTAAGAGGGATTAGTAATGGTGAAAAGAAAAGACTTAGCATTGGTCTTGAGATTTTGACACAACCCTTTGTGTTACTTCTCGATGAACCAACTAGTGGACTTGATAGTGCCTCAGCATTCTATGTGATTCAAGCTCTAAGCAACATTGCTTTTAAAGGAAAAATAGTTATTTGTTCAATTCATCAGCCAGGGTGtgaaacttttaatatttttgatgATTTGCTTTTGCTCTCAAGTGGTGAAACTGTTTATTTTGGAGAAGCAAATATGGCTCTAAAGTTTTTTGCTGATGCAGGTTTTCCTTGTCCTATCAAAAGAAATCCTTCATATCATTTTATTATGAGCATTAATTTGGATTTTGACTTCATTAATGAAGCTCTTGCAAGATGCCATCCTACATCATCAAATTCTATGGTGGGAATGAGAACGGCAGATATTAGAAAGGAACTTATAGAGAGTTACAAAAGTTCAGAACTATTCATCAACACAAGAAGAAAAATTCAGCAACTAAAAACCAATGTATTCTATGGTGAAAGATCCAAAGGACATTGTGGAGAGGCTGCATTTGTGATATCAAACATTATATCATCATTCCCTTTTCTCCTTCTAATATCACTATCCTCTGGAATAATAATTTACTTCATGGTGCAATTTCATCCTGGTTTTAcaaattgtacatttttttgTGTCAATTTATTCTGCTGTCTATCGGTTGTTGAGAGTTGCATCATGGTTGTGGCCGCAATTGTTCCCAATGTTATGACGGGTATAGGAGCAGGGACCGGTTTTATAGTTTTTATGATGATGCCTTCCCAAATATTCAGACCATTAAATGACATTCCTAAGTTCTTTTGGCGCTATCCAATGTCGTACCTCAGTTTTGCTGCTTGGGCAGTGCAGCATTTAACAAAGAACAAGCCATCAATGTCTTCTAAGAAACAAGAACTGCCACGACCATTATCGTCTCTAGAGAATGCTATGTCCCCACCACAATATTAA 2331 0.387 MAALKGLLKKSLGEMDFNAGGGLINWFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQSHLSSKRRVIALNKKDLANPNIMHKWVNYFETCKQDCIPINAHSKSSVTKLLELVEFKLKEVILKEPTLLVMVVGVPNVGKSCLINSIHQIAQSRFPVQEKMKRATVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLDTRGTPLHWKHLLNNRRIDGIAYDEENKRYNLKNLKQRRSPPNRSDLVYVEDIVVGVQHALYSTLAEFNGNVEDEGDLENLIDEQFGALQKALKIPHKASEARLMVSKKFLTLFRAGTHAANVAEAGNIQINGKRRNLYSKEVSYVCQEELFLGTLTVKETLTYSANMRLPSKLTKQEIDKIVEDTIIEMGLEDCANSKIGNWHLRGISNGEKKRLSIGLEILTQPFVLLLDEPTSGLDSASAFYVIQALSNIAFKGKIVICSIHQPGCETFNIFDDLLLLSSGETVYFGEANMALKFFADAGFPCPIKRNPSYHFIMSINLDFDFINEALARCHPTSSNSMVGMRTADIRKELIESYKSSELFINTRRKIQQLKTNVFYGERSKGHCGEAAFVISNIISSFPFLLLISLSSGIIIYFMVQFHPGFTNCTFFCVNLFCCLSVVESCIMVVAAIVPNVMTGIGAGTGFIVFMMMPSQIFRPLNDIPKFFWRYPMSYLSFAAWAVQHLTKNKPSMSSKKQELPRPLSSLENAMSPPQY 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03337 776 Gene3D - 350 539 IPR027417 -
Tsu07g03337 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 218 IPR027417 -
Tsu07g03337 776 Pfam ABC-2 type transporter 617 749 IPR013525 GO:0016020|GO:0140359
Tsu07g03337 776 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 617 750 - -
Tsu07g03337 776 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 356 617 - -
Tsu07g03337 776 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 270 548 IPR003439 GO:0005524
Tsu07g03337 776 Gene3D - 24 203 IPR027417 -
Tsu07g03337 776 MobiDBLite consensus disorder prediction 752 776 - -
Tsu07g03337 776 Pfam ABC transporter 365 476 IPR003439 GO:0005524
Tsu07g03337 776 Pfam ABC-2 type transporter 505 557 IPR043926 GO:0140359
Tsu07g03337 776 CDD YlqF 26 203 - -
Tsu07g03337 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 533 IPR027417 -
Tsu07g03337 776 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 35 205 IPR030378 GO:0005525
Tsu07g03337 776 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 617 750 - -
Tsu07g03337 776 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 356 617 - -
Tsu07g03337 776 Pfam 50S ribosome-binding GTPase 137 250 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03337 Tsu-Chr7 39753179 39765979 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03337 K19828 - gmx:100801130 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03337 07 39753179 39765979 Tsu07g03337 07 39753179 39765979 ECH