Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03332 ATGTCCGATGCATTTTGCAGCGATTGCAAGCGAGCGACGGAGGTGGTGTTCGATCATTCCGCCGGTGATGCTGTTTGTTCGGAGTGTGGTCTTGTGCTTGAATCTCACTCCATTGATGAAACCTCTGAGTGGCGAACGTTCGCTAACGAATCCGGTGATAACGATCCGGTACGTGTTGGTGGTCCGAACAATCCTCTTCTCAGCGACGGCGGTTTATCTACTGTCATTGCTAAACCTAACGGTGCATCTGGAGATTTTCTCTCGTCTTCTCTTGGACGCTGGCAGAATCGCGGTTCGAATAATGATCGTGGCTTGATCCTTGCTTTCAAAACTATTGGCACCATGTCAGAGAGGCTGGGACTCGTTCCGACCATCAAGGATCGAGCTAATGAGATATATAAGCGGGTTGAAGATCAGAAGTCTAGCAGGGGAAGAAATCAGGATGCATTATTGGCTGCTTGCCTCTACATTGCTTGTCGACAAGAAGACAAGCCACGCACTGTAAAGGAAATTTGCTCAATTGCCAATGGAGCTACCAAGAAGGAAATTGGCCGAGCAAAAGAATACATTGTGAAACAACTGGGTTTGGAGAATGGTGGTCAATCTGTAGAAATGGGCACAATTCATGCTGGGGACTTTATGAGACGATTTTGTTCTAATCTTGGTATGAATCACCAAGCTATTAAAGCTGCTCAGGAATCTGTTCAGAAATCAGAAGAATTTGATATAAGGAGAAGTCCCATATCAATTGCTGCAGCAGTTATATACATCATTACTCAGCTTTCGGATGATAAAAAACCTCTCAAAGATATATCAGTTGCCACAGGAGTTGCAGAAGGAACCATTAGGAACTCATACAAGGATCTTTATCCCCATGTTTCAAAGATAATACCAAGCTGGTATGCAAAGGAAGAGGATTTAAAGAACCTTTGCAGCCCTTAA 942 0.4437 MSDAFCSDCKRATEVVFDHSAGDAVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPNNPLLSDGGLSTVIAKPNGASGDFLSSSLGRWQNRGSNNDRGLILAFKTIGTMSERLGLVPTIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSIANGATKKEIGRAKEYIVKQLGLENGGQSVEMGTIHAGDFMRRFCSNLGMNHQAIKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEEDLKNLCSP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03332 313 SMART cyclin_7 212 291 IPR013763 -
Tsu07g03332 313 SMART cyclin_7 110 192 IPR013763 -
Tsu07g03332 313 CDD CYCLIN 208 290 IPR013763 -
Tsu07g03332 313 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Tsu07g03332 313 ProSitePatterns Transcription factor TFIIB repeat signature. 144 159 IPR023486 -
Tsu07g03332 313 SUPERFAMILY Cyclin-like 105 196 IPR036915 -
Tsu07g03332 313 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 313 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Tsu07g03332 313 CDD CYCLIN 104 185 IPR013763 -
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 55 76 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 152 171 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 179 194 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 213 231 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 245 261 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 PRINTS Transcription initiation factor IIB signature 277 291 IPR000812 GO:0006352|GO:0070897
Tsu07g03332 313 SUPERFAMILY Cyclin-like 208 309 IPR036915 -
Tsu07g03332 313 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 313 - -
Tsu07g03332 313 Gene3D - 209 312 - -
Tsu07g03332 313 Gene3D - 5 193 - -
Tsu07g03332 313 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
Tsu07g03332 313 Pfam Transcription factor TFIIB repeat 103 185 IPR013150 GO:0017025
Tsu07g03332 313 Pfam Transcription factor TFIIB repeat 205 291 IPR013150 GO:0017025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03332 Tsu-Chr7 39719413 39722905 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03332 K03124 - qsu:112032772 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03332 07 39719413 39722905 Tsu07g03332 07 39719413 39722905 ECH
Tsu07g03332 07 39719413 39722905 Tsu01g01837 01 18438878 18444142 PCT