Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03319 ATGACGAGGGTGAGAGGAGCGGTGACAAAGGGTTTCAAAGCTGTTCAAGATTTCGAACTTCTCAAACTCCTCAAATCCGAAATTCATTTTGAACTTTCTTCTAATCACTTTCAGAATGCTCAAAGAGGTTCTTCAGGTGAATTTATGGTAGACTCAGATTCACCACATTCAAAAGATGTGATTTTGAGACGAAAATGCGATTCGGGTGAAGAAGTTGCTCTTTCAGCTATATTGGGTCCTCCTAATTATGAAAAAgatcttatttttataagggATGTTTTCATGAAAGTTTGCATTAAAAAGCCAGCTTTGTCCTCTATCTTGCAATTTGATTGTAGAGCTTATCAAGAAACTGATAAAAGCTCTGAATTTGAGATCTATAATGCTTATTATCTTAGATCAGCTACATATCTTAGCACTTCCATTTACAGAGGACCTTTATTCAGTGATTTGGATATTAACTTACAAAAAGCATTCAAGGAATACCTGATAGAGAAGggcattggaggaagcttgacCAATTTCCTTCTCCACTACCTACACAAAAGAGAGCAAAAGCAATATGTGAACTGGTTGAAAACCGGAATTAGTTACTTGCATTTAATGGCTTGGGATCTATGGAGTTCATCTTTTGATCAAGTTTCTTATAATGGTGACTACTCGGAGATTCTCGAGTGGCATTGTGATTACTTTGGCTGTGGTCGTGATGAGATTGAGGAAGATGCTTTGAATTTGGAATCATGTGTTCAGGTTTTGAGAATTTTGCTCACTAAGGCAGATACTGAAATTGAGGAACTTGAAAAGGATCTCATGTGTCTTCAGAATGAATTGGCCTGGACTGAGCATGAAAAATGGCCTGAAATATGTTGTAGTGCTTTGACTGAAAGAATCAACTGGCTTGATGATGCGGTTACCATTTTGAAGAGTGATCATGCCGATGATGCAGATATGCAGCTACTATTGCAAAGTGAACCTGCTGAGACACTTCATGAAATAGTGAAGGCTTTACATAAAGATCACTGTCAAGATACACATGGCCAGCATCTAGAAGAGAACATCGTGAATCCAATTGTGAATGTTACTGAACATGTACCAGACAATGGTTCTAACAATATTGACTCAAATGATATCATAAAGGAGGGAGGAGAAGAAGACTTTGGAGCTTCAGACCTGTCTAAAAACTCAGAACTTCTTTTAGAGCTTCATGAAAATAGATCAGACAATCCTGAAAAGACCGAGACCAAGgaATTGCTCGCATTATCTCCTGTGAGGAGTCCTGATTTGGAGGTTGTTAGCTCCGTACCTTACCATTCTGATAGGATGATATTATCTGATACATTAGATAATAAAGTTACGGGAGATGAGGATGTCAGGCAAAGCCAATTCGTTACTACAGATACATGTCATATCTTGAATCCATTTTTGCCCAAGGGAAATGAAAATATTCCAAGTGAAACCAAGGAAGAAAATACAGCTCTCAAAGAAAATGTCTGCTCAGATGATAATAGACTTGCAATTATCGAAGGGAGTCAACTCGTTCTTGCGGAGTCAGGTCAAAGGTTGAATCCGATATTGTCCAAGGGAAACAAAAATATTCCAAGTGAAACCAAGGAAGTAAATATAGCTGTCAAAGAAAATGTCTGCTCCGATGATCATAGACTGCAGATTATCAAGGGGAGCCAACTCATTGCTAAAAATACAGGTCAAATCTTGAATCCATTTTCGTCTAAGGAAAGTGGAAATATTCCAAGTGGGGCCAAGATTGTGCAGGAAAAAAATACGAATCTCAACAAAAATGTAAGCTCAGACAACCTTGAAATTATCAAGAGGATGGAAATGTATTCTAGTTCCAGATTTGGTACTGGCCAACAAGAAGAAACTGAAAATTCTGATTTTGCTACAAAACTGTGTGATTTTGCTCCAAAAACTGCACAAAGAGTCTGCAGGAAAGAATCCGAGGTTGGTCCAAATGAAAATTTGGAATCTATGTGTAATTTTGTTCCAAAAACTGCACGAAGAGCCTGCAAAAAAGAATCCAAGGTTGCTCCAGATGAAGATTTGGAATCTACAGATGTACCCCTACAAATTGTTTATCctcaaaatttgtgttttggTGATACAGAATCAAGTGcctttaaagaaaataattgcaACAATGCCCTGCAAGcgataaaaattgaaaaggcCATCCTTAGTGCTGAAAATTCTGTATCAATTTCACTGCCAGGGATGCAAATGAAGAATATCCTTCGTACTAGGTTACAGCTGACGGACGAAGAGAAACCACAAGGCCAAGACCTAAAATCCAAAGTGCCTGTTAACTTCAGCAAGTCCAGTGAACGCTTCACTTTAAAGTCGAAATCTCAGGGAAAGATAAAACCTGAATTTGAGGCATGCTCAGCCAAAGAACTGTTTCCTTTAGAAGTTTTTGCAAGTACATCTAAGATTGCAACAACCAAGAGGCAGCGGAAACCAAAAAACGAGTTCATGAATAGTAAAATTACTAAGAAGTCTGTGCAAACGGGCCAGTATGAAATTGATGGCAATCCTATTGTTCTTTCTGACAGCGATGGTGATGTATCAACCAAGAGGCAGCGGAAACCAAATAGCCGTGCTCGTACAACCTTAAATGAGCCCACAAATAGTAAAGTCACTAAGAGGTCTGTGCAGCCGGGCCAGCATGAAACCGCTGGTAATGCTATTGTTCCTTATGACAGCGAATTTtctgaattacaaaagaaaagacGAGTTTCAGAGTTGTCAATTACCTCAAAAGTACAAAATTCAATTGTTAACTACTTGGACCCAACAAATTCAGATAAAGGAAAATCACCTGCGTCGGTGGATCATCATAATGAGAGCTCAGCTTTACTCCCTATTACCTCGACAGAAACCTTGGACACcttattgaaaaagaaattgcCTGAATTGAAGTGCATGGCAAAGACGCTCAATATGAAAGGCTACACTAAGTATCGGAAAGGAGATTTGGTTGAGCAAATACTTAAGCAACTCAGTAGCTGCTGA 3027 0.372 MTRVRGAVTKGFKAVQDFELLKLLKSEIHFELSSNHFQNAQRGSSGEFMVDSDSPHSKDVILRRKCDSGEEVALSAILGPPNYEKDLIFIRDVFMKVCIKKPALSSILQFDCRAYQETDKSSEFEIYNAYYLRSATYLSTSIYRGPLFSDLDINLQKAFKEYLIEKGIGGSLTNFLLHYLHKREQKQYVNWLKTGISYLHLMAWDLWSSSFDQVSYNGDYSEILEWHCDYFGCGRDEIEEDALNLESCVQVLRILLTKADTEIEELEKDLMCLQNELAWTEHEKWPEICCSALTERINWLDDAVTILKSDHADDADMQLLLQSEPAETLHEIVKALHKDHCQDTHGQHLEENIVNPIVNVTEHVPDNGSNNIDSNDIIKEGGEEDFGASDLSKNSELLLELHENRSDNPEKTETKELLALSPVRSPDLEVVSSVPYHSDRMILSDTLDNKVTGDEDVRQSQFVTTDTCHILNPFLPKGNENIPSETKEENTALKENVCSDDNRLAIIEGSQLVLAESGQRLNPILSKGNKNIPSETKEVNIAVKENVCSDDHRLQIIKGSQLIAKNTGQILNPFSSKESGNIPSGAKIVQEKNTNLNKNVSSDNLEIIKRMEMYSSSRFGTGQQEETENSDFATKLCDFAPKTAQRVCRKESEVGPNENLESMCNFVPKTARRACKKESKVAPDEDLESTDVPLQIVYPQNLCFGDTESSAFKENNCNNALQAIKIEKAILSAENSVSISLPGMQMKNILRTRLQLTDEEKPQGQDLKSKVPVNFSKSSERFTLKSKSQGKIKPEFEACSAKELFPLEVFASTSKIATTKRQRKPKNEFMNSKITKKSVQTGQYEIDGNPIVLSDSDGDVSTKRQRKPNSRARTTLNEPTNSKVTKRSVQPGQHETAGNAIVPYDSEFSELQKKRRVSELSITSKVQNSIVNYLDPTNSDKGKSPASVDHHNESSALLPITSTETLDTLLKKKLPELKCMAKTLNMKGYTKYRKGDLVEQILKQLSSC 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03319 1008 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 17 194 IPR036561 -
Tsu07g03319 1008 SUPERFAMILY Rho N-terminal domain-like 966 1005 IPR036269 -
Tsu07g03319 1008 MobiDBLite consensus disorder prediction 872 893 - -
Tsu07g03319 1008 Pfam Mitochondrial glycoprotein 95 194 IPR003428 GO:0005759
Tsu07g03319 1008 PANTHER COMPLEMENT COMPONENT 1 1 195 IPR003428 GO:0005759
Tsu07g03319 1008 Coils Coil 249 283 - -
Tsu07g03319 1008 SMART Rho_N_2_a 968 1007 IPR011112 GO:0006353
Tsu07g03319 1008 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 1 195 - -
Tsu07g03319 1008 Gene3D - 965 1007 - -
Tsu07g03319 1008 Pfam Rho termination factor, N-terminal domain 971 1005 IPR011112 GO:0006353
Tsu07g03319 1008 Gene3D Mitochondrial glycoprotein 11 199 IPR036561 -
Tsu07g03319 1008 MobiDBLite consensus disorder prediction 934 956 - -
Tsu07g03319 1008 MobiDBLite consensus disorder prediction 848 893 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03319 - K15414 cam:101495849 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03319 07 39604418 39624361 Tsu07g03319 07 39604418 39624361 ECH